RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 H7C1C5 153 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 M0R233 179 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 HSD11B1P28845 292 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 ATP5G3P48201 142 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 ROMO1P60602 79 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 LCN6P62502 163 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 MRPS15P82914 257 aaKnown RBP0.42□□□□□ -2.34
CDC40-204ENST00000431461 POU6F1Q14863 301 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 TMED4Q7Z7H5 227 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 SBSPONQ8IVN8 264 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 Q8N6K4 173 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 OR5D16Q8NGK9 328 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 PAIP2Q9BPZ3 127 aaKnown RBP0.42□□□□□ -2.34
CDC40-204ENST00000431461 MAP1LC3BQ9GZQ8 125 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 SH3BGRL3Q9H299 93 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 POPDC3Q9HBV1 291 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 TMEM138Q9NPI0 162 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 LYRM2Q9NU23 88 aaPredicted RBP0.42□□□□□ -2.34
CDC40-204ENST00000431461 SSR3Q9UNL2 185 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 SCN10AQ9Y5Y9 1956 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 MYH10P35580 1976 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 NOTCH1P46531 2555 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 CST8O60676 142 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 ATG12O94817 140 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 C1QBP02746 253 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 PRB4P10163 310 aaPredicted RBP0.41□□□□□ -2.34
CDC40-204ENST00000431461 NFYBP25208 207 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 SRIP30626 198 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 DYNLT3P51808 116 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 NCALDP61601 193 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 TAF1AQ15573 450 aaPredicted RBP0.41□□□□□ -2.34
CDC40-204ENST00000431461 SPATA45Q537H7 98 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 LINC00299Q6ZSB3 139 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 CROCCP2Q86T23 111 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 Q8IYB0 196 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 ATOH7Q8N100 152 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 NUP35Q8NFH5 326 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 PPTC7Q8NI37 304 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 ZHX1-C8orf76Q96EF9 292 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 CEP19Q96LK0 163 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 HYLS1Q96M11 299 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 MCEEQ96PE7 176 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 PBDC1Q9BVG4 233 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 CCDC94Q9BW85 323 aaPredicted RBP0.41□□□□□ -2.34
CDC40-204ENST00000431461 OR2J1Q9GZK6 312 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 STOML2Q9UJZ1 356 aa0.41□□□□□ -2.34
CDC40-204ENST00000431461 ZFYVE9O95405 1425 aa0.4□□□□□ -2.34
CDC40-204ENST00000431461 ARHGEF11O15085 1522 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 RIIAD1A6NNX1 92 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 M0R378 163 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 GPR31O00270 319 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 PFDN1O60925 122 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 ATP5HO75947 161 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 OGNP20774 298 aaKnown RBP0.4□□□□□ -2.35
CDC40-204ENST00000431461 PHBP35232 272 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 EFNA4P52798 201 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 CIRBPQ14011 172 aaKnown RBP0.4□□□□□ -2.35
CDC40-204ENST00000431461 SPINK9Q5DT21 86 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 KRTAP26-1Q6PEX3 210 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 ARPINQ7Z6K5 226 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 PXT1Q8NFP0 134 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 STAG3L4Q8TBR4 150 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 ZNF714Q96N38 554 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 RTL8AQ9BWD3 113 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 CACYBPQ9HB71 228 aaKnown RBP0.4□□□□□ -2.35
CDC40-204ENST00000431461 NIT2Q9NQR4 276 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 TAS2R7Q9NYW3 318 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 PRNDQ9UKY0 176 aa0.4□□□□□ -2.35
CDC40-204ENST00000431461 AHNAKQ09666 5890 aaKnown RBP0.4□□□□□ -2.35
CDC40-204ENST00000431461 MCM3APO60318 1980 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 DOCK3Q8IZD9 2030 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 A0A096LPI6 279 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 TMEM256-PLSCR3K7ERE1 68 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 HIST1H2BKO60814 126 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 BANF1O75531 89 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 IFNA1P01562 189 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 HIST1H2BJP06899 126 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 CYBAP13498 195 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 TCTAP57738 103 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 DHRS4L2Q6PKH6 230 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 Q6ZS92 163 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 S100A7AQ86SG5 101 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 EXOC3-AS1Q8N2X6 119 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 LRRC18Q8N456 261 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 OR4K15Q8NH41 348 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 OR13C6PQ8NH95 151 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 GRPEL2Q8TAA5 225 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 NEK7Q8TDX7 302 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 RAB37Q96AX2 223 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 CAMSAP2Q08AD1 1489 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 CECR2Q9BXF3 1484 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 EML5Q05BV3 1969 aa0.39□□□□□ -2.35
CDC40-204ENST00000431461 YTHDC2Q9H6S0 1430 aaKnown RBP0.38□□□□□ -2.35
CDC40-204ENST00000431461 MYH7BA7E2Y1 1941 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 MYLKQ15746 1914 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 COL1A1P02452 1464 aaPredicted RBP0.38□□□□□ -2.35
CDC40-204ENST00000431461 EIF3AQ14152 1382 aaKnown RBP0.38□□□□□ -2.35
CDC40-204ENST00000431461 RFX7Q2KHR2 1363 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 hDV103S1A0JD37 113 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 JMJD7-PLA2G4BH0Y9G9 81 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms