RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 IGLL1P15814 213 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 FOXA3P55318 350 aaPredicted RBP9.12□□□□□ -0.95
LINC01238-203ENST00000429456 EXOC3-AS1Q8N2X6 119 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 RPEQ96AT9 228 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 RASL11BQ9BPW5 248 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
LINC01238-203ENST00000429456 TMEM70Q9BUB7 260 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 ABCA1O95477 2261 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 LYNX1G3V0Z9 82 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 OVOL3O00110 214 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 HAX1O00165 279 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 CRXO43186 299 aaPredicted RBP9.11□□□□□ -0.95
LINC01238-203ENST00000429456 NDUFB8O95169 186 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 IGKV1-17P01599 117 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 APOHP02749 345 aaPredicted RBP9.11□□□□□ -0.95
LINC01238-203ENST00000429456 LYNX1P0DP58 116 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 COX7A1P24310 79 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 COL8A1P27658 744 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 GOLT1AQ6ZVE7 132 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 PRNTQ86SH4 94 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 TMEM190Q8WZ59 177 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 NDFIP1Q9BT67 221 aa9.11□□□□□ -0.95
LINC01238-203ENST00000429456 LOC102724200A0A096LPH7 203 aaPredicted RBP9.1□□□□□ -0.95
LINC01238-203ENST00000429456 PPIAL4CA0A0B4J2A2 164 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 IGHV1-24A0A0C4DH33 117 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 ZNF785A8K8V0 405 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 M0QZ24 198 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 CD3EP07766 207 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 PPIAL4GP0DN37 164 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 Q71RC1 249 aaPredicted RBP9.1□□□□□ -0.95
LINC01238-203ENST00000429456 WFDC12Q8WWY7 111 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 RNF24Q9Y225 148 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 MAP1BP46821 2468 aaKnown RBP9.1□□□□□ -0.95
LINC01238-203ENST00000429456 POLEQ07864 2286 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.1□□□□□ -0.95
LINC01238-203ENST00000429456 K7EIM0 57 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 CHEK1O14757 476 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 RBX1P62877 108 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 SHANK2-AS3Q9BTD1 123 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 SCNM1Q9BWG6 230 aa9.1□□□□□ -0.95
LINC01238-203ENST00000429456 TRBV19A0A075B6N1 114 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 H3BRN7 92 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 TCF15Q12870 199 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 PLGLAQ15195 96 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 PRR30Q53SZ7 412 aaPredicted RBP9.09□□□□□ -0.95
LINC01238-203ENST00000429456 TMEM75Q8N9X5 138 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 ACACAQ13085 2346 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 SYS1-DBNDD2H3BUS1 97 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 TOX4O94842 621 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 DMRTA1Q5VZB9 504 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 BPIFA4PQ86YQ2 179 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 OR4F17Q8NGA8 305 aa9.09□□□□□ -0.95
LINC01238-203ENST00000429456 OR4C46A6NHA9 309 aa9.08□□□□□ -0.96
LINC01238-203ENST00000429456 LEPROTL1O95214 131 aa9.08□□□□□ -0.96
LINC01238-203ENST00000429456 HINT1P49773 126 aaPredicted RBP9.08□□□□□ -0.96
LINC01238-203ENST00000429456 ODF1Q14990 250 aa9.08□□□□□ -0.96
LINC01238-203ENST00000429456 LDLRAD2Q5SZI1 272 aa9.08□□□□□ -0.96
LINC01238-203ENST00000429456 SIGLEC15Q6ZMC9 328 aa9.08□□□□□ -0.96
LINC01238-203ENST00000429456 LYPD1Q8N2G4 141 aa9.08□□□□□ -0.96
LINC01238-203ENST00000429456 ZC2HC1AQ96GY0 325 aa9.08□□□□□ -0.96
LINC01238-203ENST00000429456 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
LINC01238-203ENST00000429456 APC2O95996 2303 aa9.08□□□□□ -0.96
LINC01238-203ENST00000429456 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.07□□□□□ -0.96
LINC01238-203ENST00000429456 TIMM23O14925 209 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 MRPS12O15235 138 aaKnown RBP9.07□□□□□ -0.96
LINC01238-203ENST00000429456 SIAH2O43255 324 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 CNIH1O95406 144 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 MUC15Q8N387 334 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 ZNF491Q8N8L2 437 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 GATD1Q8NB37 220 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 A0A1B0GUT8 65 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 HLA-DRB1P01911 266 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 OR5AL1P0C617 328 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 LY6G5BQ8NDX9 201 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 ORAOV1Q8WV07 137 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 VKORC1Q9BQB6 163 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 ST20Q9HBF5 79 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 AKAP13Q12802 2813 aa9.07□□□□□ -0.96
LINC01238-203ENST00000429456 WI2-2373I1.2A0A1W2PRP0 233 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 LIPFP07098 398 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 PSG3Q16557 428 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 RNF125Q96EQ8 232 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 ONECUT1Q9UBC0 465 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 NBR2O15453 112 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 RIGQ13278 110 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 ZNF672Q499Z4 452 aaPredicted RBP9.06□□□□□ -0.96
LINC01238-203ENST00000429456 NPBQ8NG41 125 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 LINC01560Q8TB33 94 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 CFHR4Q92496 578 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 ZNF414Q96IQ9 312 aa9.06□□□□□ -0.96
LINC01238-203ENST00000429456 K7EQM0 130 aa9.05□□□□□ -0.96
LINC01238-203ENST00000429456 NDUFA3O95167 84 aa9.05□□□□□ -0.96
LINC01238-203ENST00000429456 HTR1DP28221 377 aa9.05□□□□□ -0.96
LINC01238-203ENST00000429456 CRIP1P50238 77 aa9.05□□□□□ -0.96
LINC01238-203ENST00000429456 ZNF138P52744 262 aa9.05□□□□□ -0.96
LINC01238-203ENST00000429456 PET117Q6UWS5 81 aa9.05□□□□□ -0.96
LINC01238-203ENST00000429456 ASCL2Q99929 193 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms