RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ZNF138P52744 262 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 EIF4EBP1Q13541 118 aaPredicted RBP6.53□□□□□ -1.36
HPS4-205ENST00000429411 COX19Q49B96 90 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 GOLT1AQ6ZVE7 132 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 SSX8Q7RTT4 187 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 Q8N7P7 452 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 WASHC3Q9Y3C0 194 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 FAM215AQ9Y5M1 114 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 V9GYV3 84 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 F8P00451 2351 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 NCBP2LA6PVI3 153 aaKnown RBP6.52□□□□□ -1.37
HPS4-205ENST00000429411 C17orf100A8MU93 164 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 K7EP13 123 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 CCL21O00585 134 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 HYPMO75409 117 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 CNTFRP26992 372 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 Q6ZVH6 145 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 SMIM20Q8N5G0 67 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 PEF1Q9UBV8 284 aaKnown RBP6.52□□□□□ -1.37
HPS4-205ENST00000429411 LSM4Q9Y4Z0 139 aaKnown RBP6.52□□□□□ -1.37
HPS4-205ENST00000429411 CELSR2Q9HCU4 2923 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 C20orf202A1L168 122 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 MT-ND6P03923 174 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 HIST1H1EP10412 219 aaKnown RBP6.52□□□□□ -1.37
HPS4-205ENST00000429411 EDN2P20800 178 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 HTR1DP28221 377 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 PTTG1IPP53801 180 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 WT1-ASQ06250 92 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 ZNF788Q6ZQV5 615 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 LINC01560Q8TB33 94 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 SS18L2Q9UHA2 77 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 LOC389332A0A1B0GUA5 103 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 IGHV3-23P01764 117 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 C3orf79P0CE67 100 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 VAMP3Q15836 100 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 COA6Q5JTJ3 125 aaKnown RBP6.52□□□□□ -1.37
HPS4-205ENST00000429411 OSR1Q8TAX0 266 aaPredicted RBP6.52□□□□□ -1.37
HPS4-205ENST00000429411 SMIM12Q96EX1 92 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 MIEN1Q9BRT3 115 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 LINC00312Q9Y6C7 94 aa6.52□□□□□ -1.37
HPS4-205ENST00000429411 TENM4Q6N022 2769 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 ZNF324O75467 553 aaPredicted RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 GPX1P07203 203 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 CX3CL1P78423 397 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 PRR20EP86478 221 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 PRR20CP86479 221 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 PRR20DP86480 221 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 PRR20BP86481 221 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 PRR20AP86496 221 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 SLC25A48Q6ZT89 311 aaKnown RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 KCNS1Q96KK3 526 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 SFXN3Q9BWM7 321 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 FNDC4Q9H6D8 234 aaPredicted RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 H0YJW9 148 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 BMPR1BO00238 502 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 RIPPLY3P57055 190 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 ARF6P62330 175 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 KLF17Q5JT82 389 aaPredicted RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 EXOC3-AS1Q8N2X6 119 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 KLHDC1Q8N7A1 406 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 OR4B1Q8NGF8 309 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 RASL11BQ9BPW5 248 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 SIRPDQ9H106 197 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 A0A1W2PRE2 83 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 A0A1W2PS18 150 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 MBD3L4A6NDZ8 208 aaPredicted RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 MBD3L3A6NE82 208 aaPredicted RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 MBD3L5A6NJ08 208 aaPredicted RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 FAM90A9PA6NNJ1 464 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 C9JCJ5 164 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 YPEL3P61236 119 aaPredicted RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 C5orf47Q569G3 176 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 MBD3L2Q8NHZ7 208 aaPredicted RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 DDB2Q92466 427 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 RITA1Q96K30 269 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 GNB1LQ9BYB4 327 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 OSTCQ9NRP0 149 aa6.51□□□□□ -1.37
HPS4-205ENST00000429411 MRPL36Q9P0J6 103 aaKnown RBP6.51□□□□□ -1.37
HPS4-205ENST00000429411 PPOXP50336 477 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 RBPJQ06330 500 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 TMEM136Q6ZRR5 245 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 SRSF12Q8WXF0 261 aaKnown RBP6.5□□□□□ -1.37
HPS4-205ENST00000429411 IGHV3OR16-13A0A075B7E8 117 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 IGHV3-74A0A0B4J1X5 117 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 A0A1W2PPI3 338 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 IZUMO1RA6ND01 250 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 GNG7O60262 68 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 PDLIM4P50479 330 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 RAB9AP51151 201 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 C2orf83Q53S99 150 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 C1orf174Q8IYL3 243 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 CIARTQ8N365 385 aaPredicted RBP6.5□□□□□ -1.37
HPS4-205ENST00000429411 C1orf159Q96HA4 380 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 RNF114Q9Y508 228 aa6.5□□□□□ -1.37
HPS4-205ENST00000429411 A0A0G2JNJ9 132 aa6.49□□□□□ -1.37
HPS4-205ENST00000429411 TCRBV4S1A1TA0A5B7 111 aa6.49□□□□□ -1.37
HPS4-205ENST00000429411 CT45A10P0DMU9 189 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms