RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ASPHD1Q5U4P2 390 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 FANCD2OSQ96PS1 177 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 NEU1Q99519 415 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 GNB4Q9HAV0 340 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 LPAR2Q9HBW0 351 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 C21orf62Q9NYP8 219 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 SOX21Q9Y651 276 aaPredicted RBP10.79□□□□□ -0.68
THBS3-202ENST00000428962 BMPR1BO00238 502 aa10.78□□□□□ -0.68
THBS3-202ENST00000428962 NDUFS7O75251 213 aa10.78□□□□□ -0.68
THBS3-202ENST00000428962 LINC00310P59036 64 aa10.78□□□□□ -0.68
THBS3-202ENST00000428962 NDPQ00604 133 aa10.78□□□□□ -0.68
THBS3-202ENST00000428962 Q56UQ5 140 aa10.78□□□□□ -0.68
THBS3-202ENST00000428962 PRO1933Q9H354 126 aa10.78□□□□□ -0.68
THBS3-202ENST00000428962 PPP1R14DQ9NXH3 145 aa10.78□□□□□ -0.68
THBS3-202ENST00000428962 NAGKQ9UJ70 344 aa10.78□□□□□ -0.68
THBS3-202ENST00000428962 C19orf71A6NCJ1 209 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 HIGD1CA8MV81 97 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 IGLC2P0DOY2 106 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 PAX1P15863 534 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 GNLYP22749 145 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 SRIP30626 198 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 S100A7P31151 101 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 FBLN7Q53RD9 439 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 KLF17Q5JT82 389 aaPredicted RBP10.77□□□□□ -0.68
THBS3-202ENST00000428962 OR4B1Q8NGF8 309 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 KCNS1Q96KK3 526 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 SGK494Q96LW2 274 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 PRSS22Q9GZN4 317 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 GFRA4Q9GZZ7 299 aa10.77□□□□□ -0.68
THBS3-202ENST00000428962 UQCRFS1P47985 274 aa10.77□□□□□ -0.69
THBS3-202ENST00000428962 PDE6HQ13956 83 aa10.77□□□□□ -0.69
THBS3-202ENST00000428962 GOLT1AQ6ZVE7 132 aa10.77□□□□□ -0.69
THBS3-202ENST00000428962 REC114Q7Z4M0 266 aa10.77□□□□□ -0.69
THBS3-202ENST00000428962 EXOC3-AS1Q8N2X6 119 aa10.77□□□□□ -0.69
THBS3-202ENST00000428962 SIGLECL1Q8N7X8 197 aa10.77□□□□□ -0.69
THBS3-202ENST00000428962 TMEM75Q8N9X5 138 aa10.77□□□□□ -0.69
THBS3-202ENST00000428962 TBX15Q96SF7 602 aa10.77□□□□□ -0.69
THBS3-202ENST00000428962 TXN2Q99757 166 aa10.77□□□□□ -0.69
THBS3-202ENST00000428962 FAM231BA6NCW3 169 aa10.76□□□□□ -0.69
THBS3-202ENST00000428962 ZNF253O75346 499 aa10.76□□□□□ -0.69
THBS3-202ENST00000428962 FCGR2BP31994 310 aaPredicted RBP10.76□□□□□ -0.69
THBS3-202ENST00000428962 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
THBS3-202ENST00000428962 ZNF664Q8N3J9 261 aa10.76□□□□□ -0.69
THBS3-202ENST00000428962 Q8N9W7 124 aa10.76□□□□□ -0.69
THBS3-202ENST00000428962 BPESC1Q9GZL8 116 aa10.76□□□□□ -0.69
THBS3-202ENST00000428962 IGHV7-81A0A0B4J1V7 117 aa10.75□□□□□ -0.69
THBS3-202ENST00000428962 GOSR1O95249 250 aa10.75□□□□□ -0.69
THBS3-202ENST00000428962 LMO4P61968 165 aa10.75□□□□□ -0.69
THBS3-202ENST00000428962 HBBP68871 147 aa10.75□□□□□ -0.69
THBS3-202ENST00000428962 SIGLEC15Q6ZMC9 328 aa10.75□□□□□ -0.69
THBS3-202ENST00000428962 HSPB9Q9BQS6 159 aa10.75□□□□□ -0.69
THBS3-202ENST00000428962 ZFP30Q9Y2G7 519 aa10.75□□□□□ -0.69
THBS3-202ENST00000428962 ARHGAP32A7KAX9 2087 aa10.75□□□□□ -0.69
THBS3-202ENST00000428962 SERTM2A0A1B0GWG4 89 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 A0A1B0GXF2 115 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 NPIPB6E9PJ23 425 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 F2Z2F3 143 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 OVOL3O00110 214 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 OR2J3O76001 311 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 Q6ZWC4 215 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 PRNTQ86SH4 94 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 FAM110DQ8TAY7 271 aaPredicted RBP10.74□□□□□ -0.69
THBS3-202ENST00000428962 VN1R17PQ8TDU5 208 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 C14orf144Q96I85 54 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 AAMDCQ9H7C9 122 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 S4R3C0 116 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 NBASA2RRP1 2371 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 ZNF705FA8MVS1 300 aaPredicted RBP10.74□□□□□ -0.69
THBS3-202ENST00000428962 F8W735 103 aaPredicted RBP10.74□□□□□ -0.69
THBS3-202ENST00000428962 C19orf84I3L1E1 186 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 MRPS12O15235 138 aaKnown RBP10.74□□□□□ -0.69
THBS3-202ENST00000428962 NDUFB8O95169 186 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 IGLV2-11P01706 119 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 ZNF705DP0CH99 300 aaPredicted RBP10.74□□□□□ -0.69
THBS3-202ENST00000428962 ZNF705BP0CI00 300 aaPredicted RBP10.74□□□□□ -0.69
THBS3-202ENST00000428962 COL8A1P27658 744 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 SAA4P35542 130 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 SLAQ13239 276 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 RBPMS2Q6ZRY4 209 aaKnown RBP10.74□□□□□ -0.69
THBS3-202ENST00000428962 ZNF414Q96IQ9 312 aa10.74□□□□□ -0.69
THBS3-202ENST00000428962 TRAV8-1A0A0A6YYK1 113 aa10.73□□□□□ -0.69
THBS3-202ENST00000428962 A8MWP6 167 aa10.73□□□□□ -0.69
THBS3-202ENST00000428962 GPX1P07203 203 aa10.73□□□□□ -0.69
THBS3-202ENST00000428962 EGR2P11161 476 aaPredicted RBP10.73□□□□□ -0.69
THBS3-202ENST00000428962 RPL7P18124 248 aaKnown RBP10.73□□□□□ -0.69
THBS3-202ENST00000428962 PSG9Q00887 426 aa10.73□□□□□ -0.69
THBS3-202ENST00000428962 KLF5Q13887 457 aaPredicted RBP10.73□□□□□ -0.69
THBS3-202ENST00000428962 LINC00322Q6ZN03 302 aaPredicted RBP10.73□□□□□ -0.69
THBS3-202ENST00000428962 FBXL7Q9UJT9 491 aa10.73□□□□□ -0.69
THBS3-202ENST00000428962 TENM4Q6N022 2769 aa10.73□□□□□ -0.69
THBS3-202ENST00000428962 NPFFO15130 113 aa10.72□□□□□ -0.69
THBS3-202ENST00000428962 ZNF324O75467 553 aaPredicted RBP10.72□□□□□ -0.69
THBS3-202ENST00000428962 CSN1S1P47710 185 aa10.72□□□□□ -0.69
THBS3-202ENST00000428962 AMTP48728 403 aa10.72□□□□□ -0.69
THBS3-202ENST00000428962 CAMPP49913 170 aa10.72□□□□□ -0.69
THBS3-202ENST00000428962 PSG3Q16557 428 aa10.72□□□□□ -0.69
THBS3-202ENST00000428962 TOMM20LQ6UXN7 152 aa10.72□□□□□ -0.69
THBS3-202ENST00000428962 TCF24Q7RTU0 167 aa10.72□□□□□ -0.69
THBS3-202ENST00000428962 ARL6IP6Q8N6S5 226 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms