RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CARHSP1Q9Y2V2 147 aaKnown RBP7.32□□□□□ -1.24
CTNND1-208ENST00000428599 TRAV5A0A0B4J249 113 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 MSMBP08118 114 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 IGFBP3P17936 291 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-208ENST00000428599 MST1P26927 711 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 MDS2Q8NDY4 140 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 TMEM170AQ8WVE7 144 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 LYZL4Q96KX0 146 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 SCRT1Q9BWW7 348 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 CACNA1GO43497 2377 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 BPESC1Q9GZL8 116 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 LAMTOR2Q9Y2Q5 125 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 TSC2P49815 1807 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 SHISA3A0PJX4 238 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 TNFRSF6BO95407 300 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 DEFB131AP59861 70 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 ZNF114Q8NC26 417 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 LY6G5BQ8NDX9 201 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 FGFBP3Q8TAT2 258 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 TIMM21Q9BVV7 248 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 RFNGQ9Y644 331 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 GPR179Q6PRD1 2367 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 C22orf46C9J442 243 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 CD55P08174 381 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 FOXG1P55316 489 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-208ENST00000428599 MEGF9Q9H1U4 602 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 SUPT4H1P63272 117 aaKnown RBP7.31□□□□□ -1.24
CTNND1-208ENST00000428599 LYZL1Q6UWQ5 148 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 TRBV25-1A0A075B6N4 114 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 D6R8Y8 96 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 SH2D1AO60880 128 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 EXOC3-AS1Q8N2X6 119 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 GGTLC1Q9BX51 225 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 H3BMM0 161 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 NCR2O95944 276 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 WDR83OSQ9Y284 106 aa7.31□□□□□ -1.24
CTNND1-208ENST00000428599 TCRAP04437 139 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 UBE2WQ96B02 151 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 PKIGQ9Y2B9 76 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 Q5BKY6 102 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 C10orf55Q5SWW7 151 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 SAMD5Q5TGI4 173 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 C2orf82Q6UX34 121 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 LHFPL4Q7Z7J7 247 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 TRPT1Q86TN4 253 aaKnown RBP7.3□□□□□ -1.24
CTNND1-208ENST00000428599 OVOL3O00110 214 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 RHODO00212 210 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 SAA4P35542 130 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 THAP8Q8NA92 274 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 OCC1Q8TAD7 63 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-208ENST00000428599 PLXNA4Q9HCM2 1894 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 H0YJW9 148 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 SSBP2P81877 361 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-208ENST00000428599 IFITM2Q01629 132 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 PSG3Q16557 428 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 C14orf178Q8N769 122 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-208ENST00000428599 NABP1Q96AH0 204 aa7.3□□□□□ -1.24
CTNND1-208ENST00000428599 FRMPD3Q5JV73 1810 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 ZNF362Q5T0B9 420 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-208ENST00000428599 TREML4Q6UXN2 200 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 COL6A6A6NMZ7 2263 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 A8MXK9 166 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 ESDP10768 282 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 LYPD1Q8N2G4 141 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 INTS1Q8N201 2190 aaKnown RBP7.29□□□□□ -1.24
CTNND1-208ENST00000428599 Q6ZS92 163 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 DEFB104AQ8WTQ1 72 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 KLHDC3Q9BQ90 382 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 MED12Q93074 2177 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 GAFA1Q96PS6 74 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 XCL2Q9UBD3 114 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 FBLN5Q9UBX5 448 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 A0A087WWL8 130 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 GAGE12JA6NER3 117 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 GAGE1Q13065 139 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 GAGE4Q13068 117 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 GAGE5Q13069 117 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 VWC2Q2TAL6 325 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 MST1LQ2TV78 715 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 NLRC5Q86WI3 1866 aa7.29□□□□□ -1.24
CTNND1-208ENST00000428599 F8VVB4 439 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 F8VWA3 439 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 ERVH48-1M5A8F1 160 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 COL8A2P25067 703 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 CACNA1BQ00975 2339 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 A0A087WV48 116 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 MBD3L4A6NDZ8 208 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-208ENST00000428599 MBD3L3A6NE82 208 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-208ENST00000428599 MBD3L5A6NJ08 208 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-208ENST00000428599 PRB4P10163 310 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-208ENST00000428599 GAS1P54826 345 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 CFHR3Q02985 330 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 GAGE2BQ13066 116 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 PMVKQ15126 192 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 KIF26BQ2KJY2 2108 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 CD177Q8N6Q3 437 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 MBD3L2Q8NHZ7 208 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-208ENST00000428599 SIGMAR1Q99720 223 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms