RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 STXBP6Q8NFX7 210 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 OR9G4Q8NGQ1 327 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 SUN5Q8TC36 379 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 TMEM14CQ9P0S9 112 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 RNF24Q9Y225 148 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 C2orf70A6NJV1 201 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 CHEK1O14757 476 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 CXorf1O96002 111 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 HBE1P02100 147 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 CSN3P07498 182 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 GP9P14770 177 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 EDN2P20800 178 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 CBLN1P23435 193 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 CCL20P78556 96 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 KHDC3LQ587J8 217 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 C12orf54Q6X4T0 127 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 C3orf56Q8N813 242 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 MARC2Q969Z3 335 aa9.49□□□□□ -0.89
TRIM39-207ENST00000428404 IGHV3OR16-13A0A075B7E8 117 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 IGHV3-49A0A0A0MS15 119 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 IGHV3-74A0A0B4J1X5 117 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 A0A1W2PS18 150 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 FOLR2P14207 255 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 GCHFRP30047 84 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 FGF8P55075 233 aaPredicted RBP9.48□□□□□ -0.89
TRIM39-207ENST00000428404 SHISA2Q6UWI4 295 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 BPIFA4PQ86YQ2 179 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 LINC00482Q8N8I6 264 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 OR4F17Q8NGA8 305 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 GLMPQ8WWB7 406 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 FXYD5Q96DB9 178 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 NARS2Q96I59 477 aaKnown RBP9.48□□□□□ -0.89
TRIM39-207ENST00000428404 C17orf77Q96MU5 243 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 GPR82Q96P67 336 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 OR4F4Q96R69 305 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 RHPN1-AS1Q9BWJ2 59 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 OR51M1Q9H341 326 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 HRH4Q9H3N8 390 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 TMPRSS5Q9H3S3 457 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 SIGLEC8Q9NYZ4 499 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 PEMTQ9UBM1 199 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 SMAD5-AS1Q9Y6J3 95 aa9.48□□□□□ -0.89
TRIM39-207ENST00000428404 ANK2Q01484 3957 aa9.47□□□□□ -0.89
TRIM39-207ENST00000428404 IGHV3-66A0A0C4DH42 116 aa9.47□□□□□ -0.89
TRIM39-207ENST00000428404 OVOL1O14753 267 aa9.47□□□□□ -0.89
TRIM39-207ENST00000428404 IGLC2P0DOY2 106 aa9.47□□□□□ -0.89
TRIM39-207ENST00000428404 PYYP10082 97 aa9.47□□□□□ -0.89
TRIM39-207ENST00000428404 RPL7P18124 248 aaKnown RBP9.47□□□□□ -0.89
TRIM39-207ENST00000428404 FAM90A2PQ658T7 463 aa9.47□□□□□ -0.89
TRIM39-207ENST00000428404 OR8I2Q8N0Y5 310 aa9.47□□□□□ -0.89
TRIM39-207ENST00000428404 A0A1B0GV50 99 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 H3BQ15 152 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 TEX46H3BTG2 121 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 OR7C2O60412 319 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 HIST1H1EP10412 219 aaKnown RBP9.46□□□□□ -0.9
TRIM39-207ENST00000428404 PSMB3P49720 205 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 GRAMD2BQ96HH9 432 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 MDFIQ99750 246 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 TMEM231Q9H6L2 316 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 TMEM167BQ9NRX6 74 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 MED9Q9NWA0 146 aa9.46□□□□□ -0.9
TRIM39-207ENST00000428404 A0A087X0K7 114 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 LINC00862A6NCI5 91 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 OR10J4P0C629 311 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 NBEAP1P0C6P0 100 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 BMI1P35226 326 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 RIPPLY3P57055 190 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 SIGLEC15Q6ZMC9 328 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 WFDC9Q8NEX5 89 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 ELOVL1Q9BW60 279 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 ZNF586Q9NXT0 402 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 MLXQ9UH92 298 aa9.45□□□□□ -0.9
TRIM39-207ENST00000428404 TRRAPQ9Y4A5 3859 aa9.44□□□□□ -0.9
TRIM39-207ENST00000428404 TRBV19A0A075B6N1 114 aa9.44□□□□□ -0.9
TRIM39-207ENST00000428404 HELTA6NFD8 242 aa9.44□□□□□ -0.9
TRIM39-207ENST00000428404 NDUFB4O95168 129 aa9.44□□□□□ -0.9
TRIM39-207ENST00000428404 PF4P02776 101 aa9.44□□□□□ -0.9
TRIM39-207ENST00000428404 GALR1P47211 349 aa9.44□□□□□ -0.9
TRIM39-207ENST00000428404 PPT1P50897 306 aa9.44□□□□□ -0.9
TRIM39-207ENST00000428404 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
TRIM39-207ENST00000428404 GUK1Q16774 197 aa9.44□□□□□ -0.9
TRIM39-207ENST00000428404 M0QZ24 198 aa9.43□□□□□ -0.9
TRIM39-207ENST00000428404 CD5P06127 495 aa9.43□□□□□ -0.9
TRIM39-207ENST00000428404 PDE6HQ13956 83 aa9.43□□□□□ -0.9
TRIM39-207ENST00000428404 DEFB114Q30KQ6 69 aa9.43□□□□□ -0.9
TRIM39-207ENST00000428404 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.43□□□□□ -0.9
TRIM39-207ENST00000428404 TCF24Q7RTU0 167 aa9.43□□□□□ -0.9
TRIM39-207ENST00000428404 IQCF2Q8IXL9 164 aa9.43□□□□□ -0.9
TRIM39-207ENST00000428404 YTHDF2Q9Y5A9 579 aaKnown RBP9.43□□□□□ -0.9
TRIM39-207ENST00000428404 ARL2-SNX15V9GYD0 113 aa9.43□□□□□ -0.9
TRIM39-207ENST00000428404 A0A1W2PRE2 83 aa9.42□□□□□ -0.9
TRIM39-207ENST00000428404 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
TRIM39-207ENST00000428404 ZNF253O75346 499 aa9.42□□□□□ -0.9
TRIM39-207ENST00000428404 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
TRIM39-207ENST00000428404 ATF4P18848 351 aaPredicted RBP9.42□□□□□ -0.9
TRIM39-207ENST00000428404 MEOX2P50222 304 aa9.42□□□□□ -0.9
TRIM39-207ENST00000428404 SPATA3Q8NHX4 192 aa9.42□□□□□ -0.9
TRIM39-207ENST00000428404 FAM210AQ96ND0 272 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms