RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 OR8I2Q8N0Y5 310 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 OR4F17Q8NGA8 305 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 ZNF48Q96MX3 618 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-210ENST00000428307 TRAV8-1A0A0A6YYK1 113 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 TGFAP01135 160 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 TCRAP04437 139 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 TYMSP04818 313 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 SLC25A16P16260 332 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 TMEM183BQ1AE95 376 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 RPEL1Q2QD12 228 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 CLEC19AQ6UXS0 136 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 CMTM2Q8TAZ6 248 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 ATG101Q9BSB4 218 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 GNB4Q9HAV0 340 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 OSTCQ9NRP0 149 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 TRBV19A0A075B6N1 114 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 ZNF705GA8MUZ8 300 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-210ENST00000428307 ZNF502Q8TBZ5 544 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 VN1R17PQ8TDU5 208 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 C12orf57Q99622 126 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 TRAPPC1Q9Y5R8 145 aa8.11□□□□□ -1.11
HDAC9-210ENST00000428307 TRBV9A0A0B4J1U6 114 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 TRAV41A0A0B4J266 112 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 IFITM10A6NMD0 228 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 RNF223E7ERA6 249 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 IGLC2P0DOY2 106 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 PAX1P15863 534 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 CDX1P47902 265 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-210ENST00000428307 RPL15P61313 204 aaKnown RBP8.1□□□□□ -1.11
HDAC9-210ENST00000428307 BLCAPP62952 87 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 ACTL10Q5JWF8 245 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 GOLT1AQ6ZVE7 132 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 TCEAL7Q9BRU2 100 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 GPR61Q9BZJ8 451 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 OTORQ9NRC9 128 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 KLF12Q9Y4X4 402 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 NBPF19A0A087WUL8 3843 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 TRAV20A0A0B4J274 112 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 MRPS12O15235 138 aaKnown RBP8.1□□□□□ -1.11
HDAC9-210ENST00000428307 CBLN1P23435 193 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 LINC01356Q8N9X3 169 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 ZNF414Q96IQ9 312 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 CCDC140Q96MF4 163 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 NOL4LQ96MY1 436 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-210ENST00000428307 GPR82Q96P67 336 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 TXN2Q99757 166 aa8.1□□□□□ -1.11
HDAC9-210ENST00000428307 PCP4L1A6NKN8 68 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 M0R3E3 92 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 SCGB2A1O75556 95 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 MEOX2P50222 304 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 TOMM20LQ6UXN7 152 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 Q6ZS46 218 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 NUDT10Q8NFP7 164 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 NUDT11Q96G61 164 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 BTF3L4Q96K17 158 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 ASCL2Q99929 193 aa8.09□□□□□ -1.11
HDAC9-210ENST00000428307 IGHV3OR16-13A0A075B7E8 117 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 A0A096LNT2 108 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 IGHV3-74A0A0B4J1X5 117 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 IER3P46695 156 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 SIGLEC15Q6ZMC9 328 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 Q71RC1 249 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-210ENST00000428307 S100A7AQ86SG5 101 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 RABAC1Q9UI14 185 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 APCP25054 2843 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 IGHV3-66A0A0C4DH42 116 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 XKRY2A2RUG3 117 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 A6NDX4 124 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 LINC00322Q6ZN03 302 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-210ENST00000428307 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 FMC1Q96HJ9 113 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 RNF24Q9Y225 148 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 CREBBPQ92793 2442 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 TENM4Q6N022 2769 aa8.08□□□□□ -1.12
HDAC9-210ENST00000428307 BMPR1BO00238 502 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 GATCO43716 136 aaKnown RBP8.07□□□□□ -1.12
HDAC9-210ENST00000428307 TRGV3P03979 118 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 S100A8P05109 93 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 S100A9P06702 114 aaKnown RBP8.07□□□□□ -1.12
HDAC9-210ENST00000428307 GATA3P23771 443 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 ATP5G2Q06055 141 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 HIST3H2BBQ8N257 126 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 EEF1AKMT3Q96AZ1 226 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 MLST8Q9BVC4 326 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 GAR1Q9NY12 217 aaKnown RBP8.07□□□□□ -1.12
HDAC9-210ENST00000428307 PITPNC1Q9UKF7 332 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 IGHV3-49A0A0A0MS15 119 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 ZNF207O43670 478 aaKnown RBP8.07□□□□□ -1.12
HDAC9-210ENST00000428307 LTAP01374 205 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 IGLV2-11P01706 119 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 DEFB112Q30KQ8 113 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 IGFL4Q6B9Z1 124 aa8.07□□□□□ -1.12
HDAC9-210ENST00000428307 MRPL54Q6P161 138 aaKnown RBP8.07□□□□□ -1.12
HDAC9-210ENST00000428307 CIARTQ8N365 385 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-210ENST00000428307 SMIM27A0A1W2PRY6 76 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 IGHV4-59P01825 116 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 FABP4P15090 132 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 RPL7P18124 248 aaKnown RBP8.06□□□□□ -1.12
HDAC9-210ENST00000428307 S100A2P29034 98 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 KLK9Q2XQG4 91 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms