RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 CHD9Q3L8U1 2897 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 HSBP1L1C9JCN9 74 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 H0Y980 276 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 PSMD12O00232 456 aaPredicted RBP-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 ERC2-IT1O76042 136 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 LY6G6CO95867 125 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 SMIM10L2AP0DMW4 78 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 SMIM10L2BP0DMW5 78 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 HIST1H1TP22492 207 aaPredicted RBP-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 MAGEA2P43356 314 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 SPOPLQ6IQ16 392 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 TMEM86BQ8N661 226 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 CANT1Q8WVQ1 401 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 PPP1R2P1Q96PQ5 205 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 OR52A1Q9UKL2 312 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 PLECQ15149 4684 aaKnown RBP-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 WRNQ14191 1432 aaPredicted RBP eCLIP-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 NEO1Q92859 1461 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 CSMD3Q7Z407 3707 aa-0.67□□□□□ -2.52
LINC02541-201ENST00000427157 PLXND1Q9Y4D7 1925 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 ANK3Q12955 4377 aaKnown RBP-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 DOPEY2Q9Y3R5 2298 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 B4DSR2 109 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 GPR31O00270 319 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 PIRO00625 290 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 CALUO43852 315 aaPredicted RBP-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 CXCL8P10145 99 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 ROMO1P60602 79 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 SKP1P63208 163 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 MED21Q13503 144 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 ZNF431Q8TF32 576 aaPredicted RBP-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 GGACTQ9BVM4 153 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 DRC3Q9H069 523 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 PROK2Q9HC23 129 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 LSM5Q9Y4Y9 91 aaKnown RBP-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 CADP27708 2225 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 LAMA3Q16787 3333 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 CHD8Q9HCK8 2581 aa-0.68□□□□□ -2.52
LINC02541-201ENST00000427157 PTPRFP10586 1907 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 E7EUB6 86 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 SERPINE1P05121 402 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 DSCR4P56555 118 aaPredicted RBP-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 OGFRL1Q5TC84 451 aaPredicted RBP-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 CD200R1LQ6Q8B3 271 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 KRT222Q8N1A0 295 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 C20orf27Q9GZN8 174 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 UCK1Q9HA47 277 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 OPTCQ9UBM4 332 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 FBXO5Q9UKT4 447 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 CNOT1A5YKK6 2376 aaKnown RBP-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 TACC2O95359 2948 aa-0.69□□□□□ -2.52
LINC02541-201ENST00000427157 AKAP13Q12802 2813 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 ROBO3Q96MS0 1386 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 JMJD1CQ15652 2540 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 ATRQ13535 2644 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 LRRN3E7EW58 273 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 CYB5BO43169 146 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 RBP1P09455 135 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 RNASE4P34096 147 aaKnown RBP-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 SPCS3P61009 180 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 PSME3P61289 254 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 OCIAD2Q56VL3 154 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 CLEC6AQ6EIG7 209 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 ANGPTL5Q86XS5 388 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 OR52E6Q96RD3 313 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 LINC00467Q9BRT7 94 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 PBOV1Q9GZY1 135 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 SCN8AQ9UQD0 1980 aa-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 PRKDCP78527 4128 aaKnown RBP-0.7□□□□□ -2.52
LINC02541-201ENST00000427157 ERBINQ96RT1 1412 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 HTTP42858 3142 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 TRAV26-2A0A0B4J265 109 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 ODAMA1E959 279 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 OR4C46A6NHA9 309 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 TNNC2P02585 160 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 PRM1P04553 51 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 OCM2P0CE71 109 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 CD79AP11912 226 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 AP2S1P53680 142 aaPredicted RBP-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 PDZD9Q8IXQ8 264 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 OR10K1Q8NGX5 313 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 KIFC1Q9BW19 673 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 CCDC90BQ9GZT6 254 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 LY96Q9Y6Y9 160 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 LAMA1P25391 3075 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 MGAMO43451 1857 aa-0.71□□□□□ -2.52
LINC02541-201ENST00000427157 PKD1P98161 4303 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 PCNX1Q96RV3 2341 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 SPTBN2O15020 2390 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 SLC16A4O15374 487 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 SPRR2EP22531 72 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 SPRR2AP35326 72 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 RPL37AP61513 92 aaKnown RBP-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 CDK6Q00534 326 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 C1orf134Q5TEV5 83 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 FAM9CQ8IZT9 166 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 OR5AS1Q8N127 324 aa-0.72□□□□□ -2.52
LINC02541-201ENST00000427157 FAM172AQ8WUF8 416 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms