RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 B2MP61769 119 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 SELENOTP62341 195 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 LGALSLQ3ZCW2 172 aaPredicted RBP4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 SPATA31B1PQ5VZV4 182 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 LAMTOR1Q6IAA8 161 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 C16orf54Q6UWD8 224 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 TMUB2Q71RG4 321 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 TCF24Q7RTU0 167 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 KCNRGQ8N5I3 272 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 HSD17B11Q8NBQ5 300 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 GLMPQ8WWB7 406 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 SHANK2-AS3Q9BTD1 123 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 SCRT1Q9BWW7 348 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 PARD6GQ9BYG4 376 aaPredicted RBP4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 SH3BGRL3Q9H299 93 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 SLC39A9Q9NUM3 307 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 AP5S1Q9NUS5 200 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 TECRQ9NZ01 308 aaKnown RBP4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 HIGD1AQ9Y241 93 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 SMAD5-AS1Q9Y6J3 95 aa4.28□□□□□ -1.72
HERPUD2-204ENST00000426180 ZNF98A6NK75 572 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 BCL2L11O43521 198 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 COX7A2P2O60397 106 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 MPDU1O75352 247 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 SNRPCP09234 159 aaKnown RBP4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 CD7P09564 240 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 GP9P14770 177 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 ATP6V0CP27449 155 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 TFPI2P48307 235 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 RAB31Q13636 194 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF345Q14585 488 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 GUCA2BQ16661 112 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 FFAR4Q5NUL3 377 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 C10orf113Q5VZT2 155 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 MIR17HGQ75NE6 70 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 C9orf62Q8N4C0 152 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 FAM24BQ8N5W8 94 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 SCGB1C1Q8TD33 95 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 PPP1R14BQ96C90 147 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 ARPC5LQ9BPX5 153 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 SPATA25Q9BR10 227 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 SLC25A39Q9BZJ4 359 aaPredicted RBP4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 GPR61Q9BZJ8 451 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 WFDC10AQ9H1F0 79 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 ARV1Q9H2C2 271 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 SLC25A32Q9H2D1 315 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 SLC25A22Q9H936 323 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 DNAJC4Q9NNZ3 241 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 AURKAIP1Q9NWT8 199 aaPredicted RBP4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF256Q9Y2P7 627 aaPredicted RBP4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 NOTCH3Q9UM47 2321 aa4.27□□□□□ -1.73
HERPUD2-204ENST00000426180 BORCS7-ASMTA0A0B4J1R7 106 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 A0A0D9SG52 128 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 A0A1W2PS18 150 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 C17orf112F2Z3M2 114 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 H3BTX0 84 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 K7EIL1 84 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 TAAR5O14804 337 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 TSPAN4O14817 238 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 MRPS12O15235 138 aaKnown RBP4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 CFDP00746 253 aaPredicted RBP4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 PRB4P10163 310 aaPredicted RBP4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 RAB2AP61019 212 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 RPL11P62913 178 aaKnown RBP4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 ZFP69Q49AA0 526 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 PXDC1Q5TGL8 231 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 LCN12Q6JVE5 192 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 SIGLEC15Q6ZMC9 328 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 RBPMS2Q6ZRY4 209 aaKnown RBP4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 SSX7Q7RTT5 188 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 LINC00305Q7Z4B0 112 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 Q8N1Y9 231 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF709Q8N972 641 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 STXBP6Q8NFX7 210 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 OR2K2Q8NGT1 345 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 MS4A6AQ9H2W1 248 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 SEPSECSQ9HD40 501 aaKnown RBP4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 UBQLN2Q9UHD9 624 aa4.26□□□□□ -1.73
HERPUD2-204ENST00000426180 TRAV25A0A0B4J276 109 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 H3BQ15 152 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 BOLA2-SMG1P6H3BVE0 249 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 K7EQG2 157 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 SOCS3O14543 225 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 PFDN1O60925 122 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 PLA2G1BP04054 148 aaKnown RBP4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 PYYP10082 97 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 DEFB1P60022 68 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 CD81P60033 236 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 DEFA6Q01524 100 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF266Q14584 549 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 ODF3L2Q3SX64 289 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 C1orf194Q5T5A4 169 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 IGFL4Q6B9Z1 124 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 FAM122CQ6P4D5 195 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 Q6ZRG5 221 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 OR8I2Q8N0Y5 310 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 DEFB125Q8N687 156 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms