RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 PSG9Q00887 426 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 ELOBQ15370 118 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 ZNF343Q6P1L6 599 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 C1QL4Q86Z23 238 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 OR10G8Q8NGN5 311 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 C2CD4CQ8TF44 421 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 BLNKQ8WV28 456 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 SFRP2Q96HF1 295 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 FMC1Q96HJ9 113 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 ATG101Q9BSB4 218 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 ELOVL1Q9BW60 279 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 PRSS22Q9GZN4 317 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 AAMDCQ9H7C9 122 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 GNB4Q9HAV0 340 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 VPREB3Q9UKI3 123 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 EPDR1Q9UM22 224 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 OTOGQ6ZRI0 2925 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 F8W735 103 aaPredicted RBP7.37□□□□□ -1.23
HMGB4-201ENST00000425537 CLEC3BP05452 202 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 CRYBA1P05813 215 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 MYCNOSP40205 109 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 CSN1S1P47710 185 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 TPPP2P59282 170 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 SLC35B1P78383 322 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 CENPWQ5EE01 88 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 C1orf194Q5T5A4 169 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 CLEC19AQ6UXS0 136 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 Q6YL49 198 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 OCC1Q8TAD7 63 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 MS4A10Q96PG2 267 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 DERL1Q9BUN8 251 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 NPFFR1Q9GZQ6 430 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 Q9H3A6 140 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 PRDM13Q9H4Q3 707 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 S4R3C0 116 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 MED13LQ71F56 2210 aa7.37□□□□□ -1.23
HMGB4-201ENST00000425537 TRBV19A0A075B6N1 114 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 PPP5D1E7EU14 171 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 ZNF253O75346 499 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 S100A6P06703 90 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 PF4V1P10720 104 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 HNF1AP20823 631 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 PPIFP30405 207 aaKnown RBP7.36□□□□□ -1.23
HMGB4-201ENST00000425537 RPS10P46783 165 aaKnown RBP7.36□□□□□ -1.23
HMGB4-201ENST00000425537 USF2Q15853 346 aaPredicted RBP7.36□□□□□ -1.23
HMGB4-201ENST00000425537 TMEM183BQ1AE95 376 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 BAGE2Q86Y30 109 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 OR8I2Q8N0Y5 310 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 TMEM86BQ8N661 226 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 GRAMD2BQ96HH9 432 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 FAM210BQ96KR6 192 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 YPEL4Q96NS1 127 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 METTL26Q96S19 204 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 OSTCQ9NRP0 149 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 CLEC5AQ9NY25 188 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 KLF12Q9Y4X4 402 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 URGCP-MRPS24S4R325 110 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 ITPR3Q14573 2671 aa7.36□□□□□ -1.23
HMGB4-201ENST00000425537 TRBV6-1A0A0K0K1D8 114 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 SH2D7A6NKC9 451 aaPredicted RBP7.35□□□□□ -1.23
HMGB4-201ENST00000425537 LINC01548A6NM66 108 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 ISLRO14498 428 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 LY6G6DO95868 133 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 GCGP01275 180 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 IGHV3-23P01764 117 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 IGHV4-59P01825 116 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 IGLC2P0DOY2 106 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 ADMP35318 185 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 ARL3P36405 182 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 ERVFC1-1P60608 527 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 FOXL1Q12952 345 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 COX19Q49B96 90 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 LEMD1Q68G75 181 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 TEX38Q6PEX7 206 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 TOMM20LQ6UXN7 152 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 IL17RELQ6ZVW7 336 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 ZNF586Q9NXT0 402 aa7.35□□□□□ -1.23
HMGB4-201ENST00000425537 MAST4O15021 2626 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 TRBV20OR9-2A0A075B6H5 130 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.34□□□□□ -1.23
HMGB4-201ENST00000425537 A0A1W2PS18 150 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 NDUFA4O00483 81 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 GGCTO75223 188 aaKnown RBP7.34□□□□□ -1.23
HMGB4-201ENST00000425537 IGLV1-40P01703 118 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 TCRAP04437 139 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 PFN1P07737 140 aaKnown RBP7.34□□□□□ -1.23
HMGB4-201ENST00000425537 MGST1P10620 155 aaKnown RBP7.34□□□□□ -1.23
HMGB4-201ENST00000425537 BMI1P35226 326 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 FAM3BP58499 235 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-201ENST00000425537 KRTAP1-1Q07627 177 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 RPEL1Q2QD12 228 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 FAM231DQ6ZW35 169 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 BCL6BQ8N143 479 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-201ENST00000425537 ZNF414Q96IQ9 312 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 IGF2BP2-AS1Q96M15 143 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 PYGO2Q9BRQ0 406 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 SLC50A1Q9BRV3 221 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 SRD5A3Q9H8P0 318 aa7.34□□□□□ -1.23
HMGB4-201ENST00000425537 IL36BQ9NZH7 164 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms