RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 TNFAIP8O95379 198 aa11.51□□□□□ -0.57
CHCHD3-202ENST00000423635 TMEM229BQ8NBD8 167 aa11.51□□□□□ -0.57
CHCHD3-202ENST00000423635 RNASE8Q8TDE3 154 aaKnown RBP11.51□□□□□ -0.57
CHCHD3-202ENST00000423635 YIPF6Q96EC8 236 aa11.51□□□□□ -0.57
CHCHD3-202ENST00000423635 C18orf15Q96N68 181 aa11.51□□□□□ -0.57
CHCHD3-202ENST00000423635 GPR82Q96P67 336 aa11.51□□□□□ -0.57
CHCHD3-202ENST00000423635 IGKV1OR2-108A0A075B7D4 117 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 EREGO14944 169 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 HPGDSO60760 199 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 ZNF182P17025 639 aaPredicted RBP11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 FUSP35637 526 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 RNASE12Q5GAN4 147 aaKnown RBP11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 GGNBP1Q5YKI7 109 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 IGFL4Q6B9Z1 124 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 THAP8Q8NA92 274 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 IL22RA2Q969J5 263 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 SLC25A39Q9BZJ4 359 aaPredicted RBP11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 RBKSQ9H477 322 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 Q9H521 79 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 SLC25A22Q9H936 323 aa11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 C14orf166Q9Y224 244 aaKnown RBP11.5□□□□□ -0.57
CHCHD3-202ENST00000423635 A0A0J9YY99 117 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 CRYM-AS1A6NIL9 109 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 ADAP1O75689 374 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 RAB3DO95716 219 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 HTN1P15515 57 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 HOXA5P20719 270 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 CCR6P51684 374 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 TAS2R19P59542 299 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 SURF2Q15527 256 aaPredicted RBP11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 RNF182Q8N6D2 247 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 TMEM263Q8WUH6 116 aaKnown RBP11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 GPR132Q9UNW8 380 aa11.49□□□□□ -0.57
CHCHD3-202ENST00000423635 KRTAP10-1P60331 282 aa11.48□□□□□ -0.57
CHCHD3-202ENST00000423635 ERVFC1-1P60608 527 aa11.48□□□□□ -0.57
CHCHD3-202ENST00000423635 GPR107Q5VW38 600 aa11.48□□□□□ -0.57
CHCHD3-202ENST00000423635 STEAP1BQ6NZ63 245 aa11.48□□□□□ -0.57
CHCHD3-202ENST00000423635 SMCO1Q147U7 214 aa11.47□□□□□ -0.57
CHCHD3-202ENST00000423635 OR8A1Q8NGG7 326 aa11.47□□□□□ -0.57
CHCHD3-202ENST00000423635 MDFICQ9P1T7 246 aa11.47□□□□□ -0.57
CHCHD3-202ENST00000423635 UBR4Q5T4S7 5183 aa11.46□□□□□ -0.57
CHCHD3-202ENST00000423635 IFNA5P01569 189 aa11.46□□□□□ -0.57
CHCHD3-202ENST00000423635 S100A7P31151 101 aa11.46□□□□□ -0.57
CHCHD3-202ENST00000423635 CDKN1BP46527 198 aa11.46□□□□□ -0.57
CHCHD3-202ENST00000423635 RHOBP62745 196 aa11.46□□□□□ -0.57
CHCHD3-202ENST00000423635 ICAM4Q14773 271 aa11.46□□□□□ -0.57
CHCHD3-202ENST00000423635 ZNF738Q8NE65 137 aa11.46□□□□□ -0.57
CHCHD3-202ENST00000423635 A0A0B4J2A0 478 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 FAM25AB3EWG3 89 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 FAM25CB3EWG5 89 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 FAM25GB3EWG6 89 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 FAM229AH3BQW9 127 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 H7BYZ3 331 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 HIST1H1AQ02539 215 aaPredicted RBP11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 C20orf144Q9BQM9 153 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 PPP1R14DQ9NXH3 145 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 SHPKQ9UHJ6 478 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
CHCHD3-202ENST00000423635 A0A096LPF7 62 aa11.44□□□□□ -0.58
CHCHD3-202ENST00000423635 SIVA1O15304 175 aa11.44□□□□□ -0.58
CHCHD3-202ENST00000423635 ORM2P19652 201 aa11.44□□□□□ -0.58
CHCHD3-202ENST00000423635 CXCL3P19876 107 aa11.44□□□□□ -0.58
CHCHD3-202ENST00000423635 RAB11AP62491 216 aa11.44□□□□□ -0.58
CHCHD3-202ENST00000423635 FGL1Q08830 312 aa11.44□□□□□ -0.58
CHCHD3-202ENST00000423635 TMEM182Q6ZP80 229 aaPredicted RBP11.44□□□□□ -0.58
CHCHD3-202ENST00000423635 C15orf40Q8WUR7 153 aa11.44□□□□□ -0.58
CHCHD3-202ENST00000423635 A0A087WTM6 91 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 GAGE12BA1L429 117 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 GAGE7O76087 117 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 GAGE12FP0CL80 117 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 GAGE12GP0CL81 117 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 GAGE12IP0CL82 117 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 GATA2P23769 480 aaPredicted RBP11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 NCS1P62166 190 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 SSBP1Q04837 148 aaKnown RBP11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 FAAP20Q6NZ36 180 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 LYZL2Q7Z4W2 148 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 BPIFCQ8NFQ6 507 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 VSIG2Q96IQ7 327 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 TMEM147Q9BVK8 224 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 PRR13Q9NZ81 148 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 EXTL2Q9UBQ6 330 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 HMCN2Q8NDA2 5059 aa11.43□□□□□ -0.58
CHCHD3-202ENST00000423635 DISC1C4P0D8 188 aa11.42□□□□□ -0.58
CHCHD3-202ENST00000423635 J3QL48 77 aa11.42□□□□□ -0.58
CHCHD3-202ENST00000423635 RLN2P04090 185 aa11.42□□□□□ -0.58
CHCHD3-202ENST00000423635 PSG3Q16557 428 aa11.42□□□□□ -0.58
CHCHD3-202ENST00000423635 MZT2AQ6P582 158 aa11.42□□□□□ -0.58
CHCHD3-202ENST00000423635 CCDC28AQ8IWP9 274 aa11.42□□□□□ -0.58
CHCHD3-202ENST00000423635 OR1S1Q8NH92 325 aa11.42□□□□□ -0.58
CHCHD3-202ENST00000423635 TNFRSF18Q9Y5U5 241 aa11.42□□□□□ -0.58
CHCHD3-202ENST00000423635 PRSS46E5RG02 174 aa11.41□□□□□ -0.58
CHCHD3-202ENST00000423635 H3BRN7 92 aa11.41□□□□□ -0.58
CHCHD3-202ENST00000423635 PITX3O75364 302 aa11.41□□□□□ -0.58
CHCHD3-202ENST00000423635 AKR1C4P17516 323 aa11.41□□□□□ -0.58
CHCHD3-202ENST00000423635 RPL7P18124 248 aaKnown RBP11.41□□□□□ -0.58
CHCHD3-202ENST00000423635 NFE4Q86UQ8 179 aa11.41□□□□□ -0.58
CHCHD3-202ENST00000423635 A0A087X0K7 114 aa11.4□□□□□ -0.58
CHCHD3-202ENST00000423635 GCSHP23434 173 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms