RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 IGLL1P15814 213 aa12.53□□□□□ -0.4
CDH1-202ENST00000422392 TCF15Q12870 199 aa12.53□□□□□ -0.4
CDH1-202ENST00000422392 Q86TA4 180 aa12.53□□□□□ -0.4
CDH1-202ENST00000422392 I3L2K1 104 aa12.53□□□□□ -0.4
CDH1-202ENST00000422392 IGLV2-11P01706 119 aa12.53□□□□□ -0.4
CDH1-202ENST00000422392 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
CDH1-202ENST00000422392 HINT1P49773 126 aaPredicted RBP12.53□□□□□ -0.4
CDH1-202ENST00000422392 FAM120AOSQ5T036 256 aa12.53□□□□□ -0.4
CDH1-202ENST00000422392 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
CDH1-202ENST00000422392 PPIAL4CA0A0B4J2A2 164 aa12.52□□□□□ -0.4
CDH1-202ENST00000422392 PPIAL4GP0DN37 164 aa12.52□□□□□ -0.4
CDH1-202ENST00000422392 PLP1P60201 277 aa12.52□□□□□ -0.4
CDH1-202ENST00000422392 NDUFB8O95169 186 aa12.52□□□□□ -0.41
CDH1-202ENST00000422392 CNIH1O95406 144 aa12.52□□□□□ -0.41
CDH1-202ENST00000422392 IGKV1-17P01599 117 aa12.52□□□□□ -0.41
CDH1-202ENST00000422392 GRNP28799 593 aaKnown RBP12.52□□□□□ -0.41
CDH1-202ENST00000422392 TSPOP30536 169 aa12.52□□□□□ -0.41
CDH1-202ENST00000422392 KLF17Q5JT82 389 aaPredicted RBP12.52□□□□□ -0.41
CDH1-202ENST00000422392 RBPMS2Q6ZRY4 209 aaKnown RBP12.52□□□□□ -0.41
CDH1-202ENST00000422392 SMIM12Q96EX1 92 aa12.52□□□□□ -0.41
CDH1-202ENST00000422392 MCRIP2Q9BUT9 160 aaKnown RBP12.52□□□□□ -0.41
CDH1-202ENST00000422392 TIMM8BQ9Y5J9 83 aaPredicted RBP12.52□□□□□ -0.41
CDH1-202ENST00000422392 IGHV1-24A0A0C4DH33 117 aa12.51□□□□□ -0.41
CDH1-202ENST00000422392 BCL6BQ8N143 479 aaPredicted RBP12.51□□□□□ -0.41
CDH1-202ENST00000422392 KLHDC1Q8N7A1 406 aa12.51□□□□□ -0.41
CDH1-202ENST00000422392 NGBQ9NPG2 151 aa12.51□□□□□ -0.41
CDH1-202ENST00000422392 ZNF492Q9P255 531 aa12.51□□□□□ -0.41
CDH1-202ENST00000422392 ONECUT1Q9UBC0 465 aa12.51□□□□□ -0.41
CDH1-202ENST00000422392 CACNA1BQ00975 2339 aa12.51□□□□□ -0.41
CDH1-202ENST00000422392 TRAV9-2A0A087WT02 112 aa12.51□□□□□ -0.41
CDH1-202ENST00000422392 ZNF785A8K8V0 405 aa12.51□□□□□ -0.41
CDH1-202ENST00000422392 HILPDAQ9Y5L2 63 aa12.51□□□□□ -0.41
CDH1-202ENST00000422392 CHEK1O14757 476 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 TIMM23O14925 209 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 CD3EP07766 207 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 FBLN7Q53RD9 439 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 TNFRSF14Q92956 283 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 OTORQ9NRC9 128 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 ATRXP46100 2492 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 CSN3P07498 182 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 GAGE1Q13065 139 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 TMEM70Q9BUB7 260 aa12.5□□□□□ -0.41
CDH1-202ENST00000422392 A0A1W2PRD5 423 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 A0A1W2PRF3 423 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 A0A1W2PRM7 423 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 B9A039 149 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 H0Y8G0 127 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 CT83Q5H943 113 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 OR4C46A6NHA9 309 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 K7EIM0 57 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 RBPJQ06330 500 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 MUC15Q8N387 334 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 ZFP30Q9Y2G7 519 aa12.49□□□□□ -0.41
CDH1-202ENST00000422392 LOC102724200A0A096LPH7 203 aaPredicted RBP12.48□□□□□ -0.41
CDH1-202ENST00000422392 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
CDH1-202ENST00000422392 M0R3E3 92 aa12.48□□□□□ -0.41
CDH1-202ENST00000422392 SIAH2O43255 324 aa12.48□□□□□ -0.41
CDH1-202ENST00000422392 CELSR1Q9NYQ6 3014 aa12.48□□□□□ -0.41
CDH1-202ENST00000422392 hDV102S1A0JD36 115 aa12.48□□□□□ -0.41
CDH1-202ENST00000422392 FAM90A27PA6NNH2 459 aa12.48□□□□□ -0.41
CDH1-202ENST00000422392 APOHP02749 345 aaPredicted RBP12.48□□□□□ -0.41
CDH1-202ENST00000422392 ARMS2P0C7Q2 107 aa12.48□□□□□ -0.41
CDH1-202ENST00000422392 UNQ5815/PRO19632Q6UWF5 114 aa12.48□□□□□ -0.41
CDH1-202ENST00000422392 OVOL3O00110 214 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 LEPROTL1O95214 131 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 IL4P05112 153 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 LINC00614P0C842 121 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 ARF6P62330 175 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 KLRD1Q13241 179 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 TPPP3Q9BW30 176 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 GFRA4Q9GZZ7 299 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 TRBV19A0A075B6N1 114 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 TMEM14CQ9P0S9 112 aa12.47□□□□□ -0.41
CDH1-202ENST00000422392 SPTBN1Q01082 2364 aaKnown RBP12.46□□□□□ -0.41
CDH1-202ENST00000422392 LY6LH3BQJ8 138 aa12.46□□□□□ -0.41
CDH1-202ENST00000422392 TCF21O43680 179 aa12.46□□□□□ -0.41
CDH1-202ENST00000422392 PAX2Q02962 417 aa12.46□□□□□ -0.41
CDH1-202ENST00000422392 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
CDH1-202ENST00000422392 ZNF491Q8N8L2 437 aa12.46□□□□□ -0.41
CDH1-202ENST00000422392 OR4F17Q8NGA8 305 aa12.46□□□□□ -0.41
CDH1-202ENST00000422392 RBM14Q96PK6 669 aaKnown RBP12.46□□□□□ -0.41
CDH1-202ENST00000422392 IGF2RP11717 2491 aa12.46□□□□□ -0.41
CDH1-202ENST00000422392 SYS1-DBNDD2H3BUS1 97 aa12.46□□□□□ -0.42
CDH1-202ENST00000422392 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.42
CDH1-202ENST00000422392 BPIFA4PQ86YQ2 179 aa12.46□□□□□ -0.42
CDH1-202ENST00000422392 PMCHL2Q9BQD1 86 aa12.46□□□□□ -0.42
CDH1-202ENST00000422392 SOX21Q9Y651 276 aaPredicted RBP12.46□□□□□ -0.42
CDH1-202ENST00000422392 VPS13CQ709C8 3753 aa12.46□□□□□ -0.42
CDH1-202ENST00000422392 HLA-DRB1P01911 266 aa12.45□□□□□ -0.42
CDH1-202ENST00000422392 HOXB4P17483 251 aaPredicted RBP12.45□□□□□ -0.42
CDH1-202ENST00000422392 SIGLEC15Q6ZMC9 328 aa12.45□□□□□ -0.42
CDH1-202ENST00000422392 SHANK2-AS3Q9BTD1 123 aa12.45□□□□□ -0.42
CDH1-202ENST00000422392 TMUB1Q9BVT8 246 aa12.45□□□□□ -0.42
CDH1-202ENST00000422392 COL6A6A6NMZ7 2263 aa12.45□□□□□ -0.42
CDH1-202ENST00000422392 HTR1DP28221 377 aa12.45□□□□□ -0.42
CDH1-202ENST00000422392 CRIP1P50238 77 aa12.45□□□□□ -0.42
CDH1-202ENST00000422392 RNF125Q96EQ8 232 aa12.45□□□□□ -0.42
CDH1-202ENST00000422392 C8orf49Q96NF6 230 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms