RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 COL11A2P13942 1736 aaPredicted RBP10.09□□□□□ -0.79
CLCN4-203ENST00000421085 TRBV6-6A0A0A6YYG2 114 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 ARMS2P0C7Q2 107 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 C15orf32Q32M92 178 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 TMEM200BQ69YZ2 307 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 IGHV2-26A0A0B4J1V2 119 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 PRSS57Q6UWY2 283 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 GGNQ86UU5 652 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 TNFRSF14Q92956 283 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 Q6P435 159 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 Q86TA4 180 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 ASCL4Q6XD76 172 aa10.09□□□□□ -0.79
CLCN4-203ENST00000421085 CYYR1Q96J86 154 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 JPT2Q9H910 190 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 C20orf204Q6ZNR8 217 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 LIME1Q9H400 295 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 FAM168AQ92567 244 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 ABHD17AQ96GS6 310 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 H0YJW9 148 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 IGLV3-19P01714 112 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 SPXQ9BT56 116 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 A0A0G2JMZ2 1700 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 LRRC37A2A6NM11 1700 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 LRRC37AA6NMS7 1700 aa10.08□□□□□ -0.8
CLCN4-203ENST00000421085 IGHV1-3A0A0C4DH29 117 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 SRRM4A7MD48 611 aaKnown RBP10.07□□□□□ -0.8
CLCN4-203ENST00000421085 IGLL1P15814 213 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 CLPSP04118 112 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 CFHR2P36980 270 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 Q6ZS49 121 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 RASL10AQ92737 203 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 RCHY1Q96PM5 261 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 GREB1Q4ZG55 1949 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 K7EP34 96 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 ETDBQ3ZM63 59 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 LYPD1Q8N2G4 141 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 CITED2Q99967 270 aaPredicted RBP10.07□□□□□ -0.8
CLCN4-203ENST00000421085 TIMM21Q9BVV7 248 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 IGHV1-8P0DP01 117 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 NDPQ00604 133 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 RTTNQ86VV8 2226 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 H3BMM0 161 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 UBE2WQ96B02 151 aa10.07□□□□□ -0.8
CLCN4-203ENST00000421085 TMEM213A2RRL7 107 aa10.06□□□□□ -0.8
CLCN4-203ENST00000421085 LEPROTO15243 131 aa10.06□□□□□ -0.8
CLCN4-203ENST00000421085 RNASE2P10153 161 aaKnown RBP10.06□□□□□ -0.8
CLCN4-203ENST00000421085 F8W1H4 67 aa10.06□□□□□ -0.8
CLCN4-203ENST00000421085 RALGAPA2Q2PPJ7 1873 aa10.06□□□□□ -0.8
CLCN4-203ENST00000421085 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
CLCN4-203ENST00000421085 SBF2Q86WG5 1849 aa10.06□□□□□ -0.8
CLCN4-203ENST00000421085 LOC285556D6RIA3 1793 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 TRAV41A0A0B4J266 112 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 SLAQ13239 276 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 VDAC2P45880 294 aaPredicted RBP10.05□□□□□ -0.8
CLCN4-203ENST00000421085 TCF15Q12870 199 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 ATP6V0BQ99437 205 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 ERCC8Q13216 396 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 SLX1AQ9BQ83 275 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 IGHV1-24A0A0C4DH33 117 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 FNDC10F2Z333 226 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 ZNF688P0C7X2 276 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 PPDPFLQ8WWR9 84 aa10.05□□□□□ -0.8
CLCN4-203ENST00000421085 A0A087WWL8 130 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 VWC2LB2RUY7 222 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 NCOR1P1Q9H4R4 102 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 COX8AP10176 69 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 BVES-AS1Q5T3Y7 98 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 LINC00477Q96M19 166 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 YPEL3P61236 119 aaPredicted RBP10.04□□□□□ -0.8
CLCN4-203ENST00000421085 GAGE12HA6NDE8 117 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 WNT2P09544 360 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 PAX9P55771 341 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 CFPP27918 469 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 FHL1Q13642 323 aa10.04□□□□□ -0.8
CLCN4-203ENST00000421085 TRBV20-1A0A075B6N2 111 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 A0A1W2PPM0 123 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 KLRD1Q13241 179 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 C9orf139Q6ZV77 190 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 RNASE6Q93091 150 aaKnown RBP10.03□□□□□ -0.8
CLCN4-203ENST00000421085 ZNF492Q9P255 531 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 GREB1LQ9C091 1923 aaPredicted RBP10.03□□□□□ -0.8
CLCN4-203ENST00000421085 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.03□□□□□ -0.8
CLCN4-203ENST00000421085 E9PLN8 166 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 LRRK1Q38SD2 2015 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 CDPF1Q6NVV7 123 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 V9GYV3 84 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 IL18BPO95998 194 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 AZU1P20160 251 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 THBDP07204 575 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 SLC25A16P16260 332 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 C1orf159Q96HA4 380 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 C8orf49Q96NF6 230 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 LTBP4Q8N2S1 1624 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 IGKV1-6A0A0C4DH72 117 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 FCN3O75636 299 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 IFITM1P13164 125 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms