RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 CCDC168Q8NDH2 2452 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 TRBV20-1A0A075B6N2 111 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 TRGV10A0A0A0MS01 117 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.8□□□□□ -0.52
CHRD-204ENST00000420973 IGLV1-44P01699 117 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 ERVK-16P61578 105 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 SSBP2P81877 361 aaPredicted RBP11.8□□□□□ -0.52
CHRD-204ENST00000420973 TFF3Q07654 80 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 MZT1Q08AG7 82 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 ZNF645Q8N7E2 425 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 CALYQ9NYX4 217 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 SMIM13P0DJ93 91 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 VDAC2P45880 294 aaPredicted RBP11.8□□□□□ -0.52
CHRD-204ENST00000420973 ASPHD1Q5U4P2 390 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 S1PR3Q99500 378 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 H3BMG7 143 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 IGF2-ASQ6U949 168 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 TRAV3A0A0B4J244 114 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 SRRM5B3KS81 715 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 CSN3P07498 182 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 CX3CL1P78423 397 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 AMTNQ6UX39 209 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 IGFBPL1Q8WX77 278 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 GPR82Q96P67 336 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 VGLL1Q99990 258 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 A1L4Q6 167 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 K7EN84 100 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 MGST3O14880 152 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 SLC35E4Q6ICL7 350 aa11.79□□□□□ -0.52
CHRD-204ENST00000420973 SPANXB1Q9NS25 103 aaPredicted RBP11.79□□□□□ -0.52
CHRD-204ENST00000420973 APOMO95445 188 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 IGLV2-14P01704 120 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 ZNF134P52741 427 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 TIGITQ495A1 244 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 PQLC2Q6ZP29 291 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 ABHD12Q8N2K0 398 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 TEX29Q8N6K0 151 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 RAB1CQ92928 201 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 RAB1BQ9H0U4 201 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 HCFC1P51610 2035 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 NMUP48645 174 aa11.78□□□□□ -0.52
CHRD-204ENST00000420973 LRRC30A6NM36 301 aa11.77□□□□□ -0.52
CHRD-204ENST00000420973 ARL14EPLP0DKL9 152 aa11.77□□□□□ -0.52
CHRD-204ENST00000420973 ABCA12Q86UK0 2595 aa11.77□□□□□ -0.53
CHRD-204ENST00000420973 MBNL2Q5VZF2 373 aaKnown RBP11.77□□□□□ -0.53
CHRD-204ENST00000420973 UBTD1Q9HAC8 227 aa11.77□□□□□ -0.53
CHRD-204ENST00000420973 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.77□□□□□ -0.53
CHRD-204ENST00000420973 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.77□□□□□ -0.53
CHRD-204ENST00000420973 K7ERJ3 54 aa11.77□□□□□ -0.53
CHRD-204ENST00000420973 COL8A2P25067 703 aa11.77□□□□□ -0.53
CHRD-204ENST00000420973 SLC25A10Q9UBX3 287 aaPredicted RBP11.77□□□□□ -0.53
CHRD-204ENST00000420973 COX8AP10176 69 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 COX7A1P24310 79 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 TAS2R45P59539 299 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 ADIPOQQ15848 244 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 ZFAND6Q6FIF0 208 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 C3orf56Q8N813 242 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 NHLRC2Q8NBF2 726 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 SSMEM1Q8WWF3 244 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 SETD2Q9BYW2 2564 aaPredicted RBP11.76□□□□□ -0.53
CHRD-204ENST00000420973 K7ENP7 123 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 TNFRSF1AP19438 455 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 LYPD2Q6UXB3 125 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 OSR1Q8TAX0 266 aaPredicted RBP11.76□□□□□ -0.53
CHRD-204ENST00000420973 DCHS2Q6V1P9 2916 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 FLNCQ14315 2725 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 DOPEY2Q9Y3R5 2298 aa11.76□□□□□ -0.53
CHRD-204ENST00000420973 A4D1N5 150 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 OR9G9P0C7N8 305 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 C2orf91Q6ZV80 131 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 MS4A6AQ9H2W1 248 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 VCX2Q9H322 139 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 ENY2Q9NPA8 101 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 CSMD1Q96PZ7 3565 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 A0A1W2PRE2 83 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 GAGE12JA6NER3 117 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 PRSS29PA6NIE9 313 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 GAGE7O76087 117 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 GAGE12FP0CL80 117 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 GAGE12GP0CL81 117 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 GAGE12IP0CL82 117 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 CD24P25063 80 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 GAGE4Q13068 117 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
CHRD-204ENST00000420973 CENPWQ5EE01 88 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 ADTRPQ96IZ2 230 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 PPDPFQ9H3Y8 114 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 V9GYV3 84 aa11.75□□□□□ -0.53
CHRD-204ENST00000420973 TMEM189A5PLL7 270 aa11.74□□□□□ -0.53
CHRD-204ENST00000420973 TMEM147Q9BVK8 224 aa11.74□□□□□ -0.53
CHRD-204ENST00000420973 GGTLC1Q9BX51 225 aa11.74□□□□□ -0.53
CHRD-204ENST00000420973 NHP2Q9NX24 153 aaKnown RBP11.74□□□□□ -0.53
CHRD-204ENST00000420973 TEX50A0A1B0GTY4 177 aa11.74□□□□□ -0.53
CHRD-204ENST00000420973 K7EMI3 77 aa11.74□□□□□ -0.53
CHRD-204ENST00000420973 PRTN3P24158 256 aa11.74□□□□□ -0.53
CHRD-204ENST00000420973 ZNF138P52744 262 aa11.74□□□□□ -0.53
CHRD-204ENST00000420973 GAGE13Q4V321 117 aa11.74□□□□□ -0.53
CHRD-204ENST00000420973 IBA57Q5T440 356 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms