RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 A0A1W2PRS3 328 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 FAM231BA6NCW3 169 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 C12orf77C9JDV5 145 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 H0YJW9 148 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 K7EN84 100 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 M0R1X1 148 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 M0R2Z0 102 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 CCL25O15444 150 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 CRXO43186 299 aaPredicted RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 SYNGR1O43759 233 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 CD5LO43866 347 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 HSBP1O75506 76 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 TRAPPC6AO75865 159 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 CA2P00918 260 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 TGFAP01135 160 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 HIST1H1EP10412 219 aaKnown RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 COX6A1P12074 109 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 USF1P22415 310 aaPredicted RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 ACP1P24666 158 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 GDF1P27539 372 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 SRIP30626 198 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 G6PCP35575 357 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 CA7P43166 264 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 VDAC2P45880 294 aaPredicted RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 TFPI2P48307 235 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 PPOXP50336 477 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 ZNF83P51522 516 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 EDDM3BP56851 147 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 UBE2G1P62253 170 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 SEC11AP67812 179 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 HIST1H1AQ02539 215 aaPredicted RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 ZNF816Q0VGE8 651 aaPredicted RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 VAMP3Q15836 100 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 TBC1D28Q2M2D7 210 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 CENPWQ5EE01 88 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 IBA57Q5T440 356 aaKnown RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 PRAMEF5Q5TYX0 476 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 PRAMEF6Q5VXH4 476 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 SLC25A34Q6PIV7 304 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 ADAMTSL5Q6ZMM2 481 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 TCF24Q7RTU0 167 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 TCF23Q7RTU1 214 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 VASH2Q86V25 355 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 NIT1Q86X76 327 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 OR8I2Q8N0Y5 310 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 DEFB125Q8N687 156 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 ZNF439Q8NDP4 499 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 ST6GALNAC3Q8NDV1 305 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 OR8B3Q8NGG8 313 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 OR2Y1Q8NGV0 311 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 OR4S2Q8NH73 311 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 RFESDQ8TAC1 157 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 C18orf32Q8TCD1 76 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 MRAPQ8TCY5 172 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 TSKUQ8WUA8 353 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 DLX4Q92988 240 aaPredicted RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 ADTRPQ96IZ2 230 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 OR8B2Q96RD0 313 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 MGST2Q99735 147 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 VPS25Q9BRG1 176 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 FAM103A1Q9BTL3 118 aaKnown RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 DERL1Q9BUN8 251 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 GGTLC1Q9BX51 225 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 FGF23Q9GZV9 251 aaPredicted RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 TMEM191AQ9H0A3 160 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 SIRPDQ9H106 197 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 PROK2Q9HC23 129 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 HES4Q9HCC6 221 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 ENY2Q9NPA8 101 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 TNFRSF19Q9NS68 423 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 PEF1Q9UBV8 284 aaKnown RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 JPT1Q9UK76 154 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 ZNF257Q9Y2Q1 563 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 YTHDF2Q9Y5A9 579 aaKnown RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 FRYLO94915 3013 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 DOCK11Q5JSL3 2073 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 SPAG17Q6Q759 2223 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 IGHV5-10-1A0A0J9YXX1 117 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 A0A1B0GUS0 222 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 A0A1B0GW15 77 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 A6NDN8 102 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 OR4C46A6NHA9 309 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 C17orf98A8MV24 154 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 IQCF6A8MYZ5 107 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 INS-IGF2F8WCM5 200 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 SLC17A3O00476 420 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 HBZP02008 142 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 SMIM17P0DL12 118 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 C8orf88P0DMB2 117 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 SCGB1A1P11684 91 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 NTF3P20783 257 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 CCNOP22674 350 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 CRYBB3P26998 211 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 CYB561P49447 251 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 HINT1P49773 126 aaPredicted RBP1.96□□□□□ -2.1
VPS41-206ENST00000418457 DUSP3P51452 185 aaPredicted RBP1.96□□□□□ -2.1
VPS41-206ENST00000418457 KRTAP10-3P60369 221 aa1.96□□□□□ -2.1
VPS41-206ENST00000418457 HSPE1P61604 102 aaKnown RBP1.96□□□□□ -2.1
VPS41-206ENST00000418457 RPL30P62888 115 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms