RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ZNF674Q2M3X9 581 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 TOMM20LQ6UXN7 152 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 ZFP82Q8N141 532 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 OR4X2Q8NGF9 303 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 RPUSD4Q96CM3 377 aaKnown RBP16.04■□□□□ 0.16
CASC3-203ENST00000418132 SMIM7Q9BQ49 75 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 OR51M1Q9H341 326 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 NF1P21359 2839 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 IGHV3-35A0A0C4DH35 117 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 RAB5AP20339 215 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 S100A7AQ86SG5 101 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 PAXXQ9BUH6 204 aa16.04■□□□□ 0.16
CASC3-203ENST00000418132 C11orf94C9JXX5 98 aa16.03■□□□□ 0.16
CASC3-203ENST00000418132 NDUFS6O75380 124 aaKnown RBP16.03■□□□□ 0.16
CASC3-203ENST00000418132 TRBV12-3P01733 135 aa16.03■□□□□ 0.16
CASC3-203ENST00000418132 OR10J4P0C629 311 aa16.03■□□□□ 0.16
CASC3-203ENST00000418132 UBE2G2P60604 165 aa16.03■□□□□ 0.16
CASC3-203ENST00000418132 JMJD8Q96S16 334 aa16.03■□□□□ 0.16
CASC3-203ENST00000418132 ARL2-SNX15V9GYD0 113 aa16.03■□□□□ 0.16
CASC3-203ENST00000418132 BMPR1BO00238 502 aa16.02■□□□□ 0.16
CASC3-203ENST00000418132 RPLP1P05386 114 aaKnown RBP16.02■□□□□ 0.16
CASC3-203ENST00000418132 PYYP10082 97 aa16.02■□□□□ 0.16
CASC3-203ENST00000418132 UBE2L3P68036 154 aaKnown RBP16.02■□□□□ 0.16
CASC3-203ENST00000418132 FAM209BQ5JX69 171 aa16.02■□□□□ 0.16
CASC3-203ENST00000418132 LEMD1Q68G75 181 aa16.02■□□□□ 0.16
CASC3-203ENST00000418132 PARLQ9H300 379 aa16.02■□□□□ 0.16
CASC3-203ENST00000418132 NAT8Q9UHE5 227 aa16.02■□□□□ 0.16
CASC3-203ENST00000418132 GP9P14770 177 aa16.02■□□□□ 0.15
CASC3-203ENST00000418132 TMEM241Q24JQ0 296 aa16.02■□□□□ 0.15
CASC3-203ENST00000418132 C2CD4CQ8TF44 421 aa16.02■□□□□ 0.15
CASC3-203ENST00000418132 FXYD5Q96DB9 178 aa16.02■□□□□ 0.15
CASC3-203ENST00000418132 TXNDC17Q9BRA2 123 aa16.02■□□□□ 0.15
CASC3-203ENST00000418132 YTHDF2Q9Y5A9 579 aaKnown RBP16.02■□□□□ 0.15
CASC3-203ENST00000418132 CXorf65A6NEN9 183 aa16.01■□□□□ 0.15
CASC3-203ENST00000418132 CST9LP1Q5W188 147 aa16.01■□□□□ 0.15
CASC3-203ENST00000418132 KLHDC1Q8N7A1 406 aa16.01■□□□□ 0.15
CASC3-203ENST00000418132 TMEM14CQ9P0S9 112 aa16.01■□□□□ 0.15
CASC3-203ENST00000418132 RABAC1Q9UI14 185 aa16.01■□□□□ 0.15
CASC3-203ENST00000418132 ZNF98A6NK75 572 aa16■□□□□ 0.15
CASC3-203ENST00000418132 NPPCP23582 126 aa16■□□□□ 0.15
CASC3-203ENST00000418132 ATP5G3P48201 142 aa16■□□□□ 0.15
CASC3-203ENST00000418132 C1orf196B1AJZ1 125 aa16■□□□□ 0.15
CASC3-203ENST00000418132 ELOBQ15370 118 aa16■□□□□ 0.15
CASC3-203ENST00000418132 SAV1Q9H4B6 383 aaPredicted RBP16■□□□□ 0.15
CASC3-203ENST00000418132 C16orf95Q9H693 158 aa16■□□□□ 0.15
CASC3-203ENST00000418132 PEF1Q9UBV8 284 aaKnown RBP16■□□□□ 0.15
CASC3-203ENST00000418132 URGCP-MRPS24S4R325 110 aa16■□□□□ 0.15
CASC3-203ENST00000418132 RAB5BP61020 215 aa15.99■□□□□ 0.15
CASC3-203ENST00000418132 UBE2E2Q96LR5 201 aa15.99■□□□□ 0.15
CASC3-203ENST00000418132 FN1P02751 2386 aaKnown RBP15.99■□□□□ 0.15
CASC3-203ENST00000418132 IGHV3OR16-8A0A075B7F1 116 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 CLPSL1A2RUU4 121 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 NDUFA4O00483 81 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 PDE6DO43924 150 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 S100A7P31151 101 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 ADIRFQ15847 76 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 TMEM242Q9NWH2 141 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 CUBNO60494 3623 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 A0A1W2PRE2 83 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 GGCTO75223 188 aaKnown RBP15.98■□□□□ 0.15
CASC3-203ENST00000418132 BPIFA4PQ86YQ2 179 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 RNF24Q9Y225 148 aa15.98■□□□□ 0.15
CASC3-203ENST00000418132 CRLF1O75462 422 aa15.97■□□□□ 0.15
CASC3-203ENST00000418132 RPL23P62829 140 aaKnown RBP15.97■□□□□ 0.15
CASC3-203ENST00000418132 WIPF2Q8TF74 440 aaPredicted RBP15.97■□□□□ 0.15
CASC3-203ENST00000418132 OR5B12Q96R08 314 aa15.97■□□□□ 0.15
CASC3-203ENST00000418132 F8P00451 2351 aa15.97■□□□□ 0.15
CASC3-203ENST00000418132 CXCL1P09341 107 aa15.96■□□□□ 0.15
CASC3-203ENST00000418132 NBEAP1P0C6P0 100 aa15.96■□□□□ 0.15
CASC3-203ENST00000418132 BIN3Q9NQY0 253 aa15.96■□□□□ 0.15
CASC3-203ENST00000418132 MRPS12O15235 138 aaKnown RBP15.96■□□□□ 0.15
CASC3-203ENST00000418132 LGALS1P09382 135 aaKnown RBP15.96■□□□□ 0.15
CASC3-203ENST00000418132 TGIF2-C20orf24A0A0A6YYL0 155 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 HIST1H1EP10412 219 aaKnown RBP15.95■□□□□ 0.14
CASC3-203ENST00000418132 CRYBB3P26998 211 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 LINC01006Q8NI28 216 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 GGTLC3B5MD39 225 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 F6UZH7 168 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 NDUFB4O95168 129 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 TCTEX1D4Q5JR98 221 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 UNQ9165/PRO28630Q6UXU0 137 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 METTL26Q96S19 204 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 CTDSP1Q9GZU7 261 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 U3KQE9 123 aa15.95■□□□□ 0.14
CASC3-203ENST00000418132 CYSRT1A8MQ03 144 aa15.94■□□□□ 0.14
CASC3-203ENST00000418132 TCF21O43680 179 aa15.94■□□□□ 0.14
CASC3-203ENST00000418132 BUB3O43684 328 aa15.94■□□□□ 0.14
CASC3-203ENST00000418132 NDUFA7O95182 113 aa15.94■□□□□ 0.14
CASC3-203ENST00000418132 IGLC2P0DOY2 106 aa15.94■□□□□ 0.14
CASC3-203ENST00000418132 ZNF586Q9NXT0 402 aa15.94■□□□□ 0.14
CASC3-203ENST00000418132 PRELID1Q9Y255 219 aa15.94■□□□□ 0.14
CASC3-203ENST00000418132 SNRPCP09234 159 aaKnown RBP15.93■□□□□ 0.14
CASC3-203ENST00000418132 RPS10P46783 165 aaKnown RBP15.93■□□□□ 0.14
CASC3-203ENST00000418132 CDX1P47902 265 aaPredicted RBP15.93■□□□□ 0.14
CASC3-203ENST00000418132 OR4F17Q8NGA8 305 aa15.93■□□□□ 0.14
CASC3-203ENST00000418132 BLNKQ8WV28 456 aa15.93■□□□□ 0.14
CASC3-203ENST00000418132 TMEM190Q8WZ59 177 aa15.93■□□□□ 0.14
CASC3-203ENST00000418132 DERL1Q9BUN8 251 aa15.93■□□□□ 0.14
CASC3-203ENST00000418132 RPL7P18124 248 aaKnown RBP15.93■□□□□ 0.14
CASC3-203ENST00000418132 SUMO1P63165 101 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms