RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CKS1BP61024 79 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 LYPD6Q86Y78 171 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 NRN1LQ496H8 165 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 ZNF815PA8K554 130 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 B3GALT5-AS1P59052 145 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 PRCDQ00LT1 54 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 CD177Q8N6Q3 437 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 OR5A1Q8NGJ0 315 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 LOXL4Q96JB6 756 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 SPRR3Q9UBC9 169 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 PLXNA2O75051 1894 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 IGKV1-16P04430 117 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 GUSBP1Q15486 140 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 MAJINQ3KP22 176 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 SAMD5Q5TGI4 173 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 DUX3Q96PT4 197 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 SIGMAR1Q99720 223 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 VCX2Q9H322 139 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 SP9P0CG40 484 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 OR10J3Q5JRS4 329 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 BCL6BQ8N143 479 aaPredicted RBP10.57□□□□□ -0.72
SCN1B-202ENST00000415950 GTSF1LQ9H1H1 148 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 GP6Q9HCN6 339 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 ASCL4Q6XD76 172 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 OR4X2Q8NGF9 303 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 LYPD6BQ8NI32 183 aa10.57□□□□□ -0.72
SCN1B-202ENST00000415950 MLNRO43193 412 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 NPFFR1Q9GZQ6 430 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 SCRT1Q9BWW7 348 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 THSD7BQ9C0I4 1608 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 IGKV2-40A0A087WW87 121 aaPredicted RBP10.56□□□□□ -0.72
SCN1B-202ENST00000415950 A0A1B0GW15 77 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 D6R8Y8 96 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 IGKV2D-40P01614 121 aaPredicted RBP10.56□□□□□ -0.72
SCN1B-202ENST00000415950 PROK2Q9HC23 129 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 UNC80Q8N2C7 3258 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 TIMM23O14925 209 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 NBR2O15453 112 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 ST20Q9HBF5 79 aa10.56□□□□□ -0.72
SCN1B-202ENST00000415950 H7C1H1 209 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 PSG1P11464 419 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
SCN1B-202ENST00000415950 IGFL4Q6B9Z1 124 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 ABHD17AQ96GS6 310 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 DENND4AQ7Z401 1863 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 TLN2Q9Y4G6 2542 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 HOXA3O43365 443 aaPredicted RBP10.55□□□□□ -0.72
SCN1B-202ENST00000415950 RHOGP84095 191 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 TEX29Q8N6K0 151 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 ANAPC13Q9BS18 74 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 CEP295Q9C0D2 2601 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 NPC2P61916 151 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 Q8TAT8 98 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 DPH3Q96FX2 82 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 TMEM133Q9H2Q1 129 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 MUC6Q6W4X9 2439 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 CCDC168Q8NDH2 2452 aa10.55□□□□□ -0.72
SCN1B-202ENST00000415950 A0A0G2JLM5 398 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 TCRAP04437 139 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 PRTN3P24158 256 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 PAX2Q02962 417 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 GAGE13Q4V321 117 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 SPAG8Q99932 426 aaPredicted RBP10.54□□□□□ -0.72
SCN1B-202ENST00000415950 SPOCK3Q9BQ16 436 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 CYSLTR1Q9Y271 337 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 ABCA2Q9BZC7 2435 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 STPG4Q8N801 248 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 LINC01587Q99440 93 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 IGKCP01834 107 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 HTN3P15516 51 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 SRSF6Q13247 344 aaKnown RBP10.54□□□□□ -0.72
SCN1B-202ENST00000415950 FAM90A1Q86YD7 464 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 NXT2Q9NPJ8 142 aaKnown RBP10.54□□□□□ -0.72
SCN1B-202ENST00000415950 ZFP36L1Q07352 338 aaKnown RBP10.54□□□□□ -0.72
SCN1B-202ENST00000415950 SRSF1Q07955 248 aaKnown RBP eCLIP10.54□□□□□ -0.72
SCN1B-202ENST00000415950 C1orf122Q6ZSJ8 110 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 LCNL1Q6ZST4 164 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 RCHY1Q96PM5 261 aa10.54□□□□□ -0.72
SCN1B-202ENST00000415950 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 HSD52Q0P140 79 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 SEC11AP67812 179 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 C11orf44Q8N8P7 122 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-202ENST00000415950 PIMREGQ9BSJ6 248 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 C7orf69Q9H7B7 122 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 A0A1W2PRX2 142 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 CNTFRP26992 372 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 WDR86Q86TI4 376 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 COPS9Q8WXC6 57 aa10.53□□□□□ -0.72
SCN1B-202ENST00000415950 RPUSD1Q9UJJ7 312 aaKnown RBP10.53□□□□□ -0.72
SCN1B-202ENST00000415950 IGHV1-18A0A0C4DH31 117 aa10.52□□□□□ -0.72
SCN1B-202ENST00000415950 LYZL1Q6UWQ5 148 aa10.52□□□□□ -0.72
SCN1B-202ENST00000415950 TRGV2A0A075B6R0 118 aa10.52□□□□□ -0.73
SCN1B-202ENST00000415950 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.52□□□□□ -0.73
SCN1B-202ENST00000415950 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
SCN1B-202ENST00000415950 ATP5L2Q7Z4Y8 100 aa10.52□□□□□ -0.73
SCN1B-202ENST00000415950 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.73
SCN1B-202ENST00000415950 TANC2Q9HCD6 1990 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms