RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.17□□□□□ -1.58
HDAC8-211ENST00000415409 TMEM190Q8WZ59 177 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 CITED2Q99967 270 aaPredicted RBP5.17□□□□□ -1.58
HDAC8-211ENST00000415409 TCEAL7Q9BRU2 100 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 KRTAP4-2Q9BYR5 136 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 SLC25A39Q9BZJ4 359 aaPredicted RBP5.17□□□□□ -1.58
HDAC8-211ENST00000415409 PRSS22Q9GZN4 317 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 NPFFR1Q9GZQ6 430 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 PRDM13Q9H4Q3 707 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 SMCO4Q9NRQ5 59 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 TMEM14CQ9P0S9 112 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 NAT8Q9UHE5 227 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 LINC00527Q9UJ94 153 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 ZNF580Q9UK33 172 aa5.17□□□□□ -1.58
HDAC8-211ENST00000415409 YTHDF2Q9Y5A9 579 aaKnown RBP5.17□□□□□ -1.58
HDAC8-211ENST00000415409 A0A0G2JLM5 398 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 TMEM89A2RUT3 159 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 C7orf77A4D0Y5 90 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 DNASE2O00115 360 aaPredicted RBP5.16□□□□□ -1.58
HDAC8-211ENST00000415409 BMPR1BO00238 502 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 HOXA3O43365 443 aaPredicted RBP5.16□□□□□ -1.58
HDAC8-211ENST00000415409 TGOLN2O43493 480 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 CD5LO43866 347 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 NDUFB4O95168 129 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 CTSGP08311 255 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 NBEAP1P0C6P0 100 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 PYYP10082 97 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 HIST1H1EP10412 219 aaKnown RBP5.16□□□□□ -1.58
HDAC8-211ENST00000415409 PF4V1P10720 104 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 GPR183P32249 361 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 TPPP2P59282 170 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 FAM209BQ5JX69 171 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 MORN5Q5VZ52 161 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 CLEC19AQ6UXS0 136 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 BPIFA4PQ86YQ2 179 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 TMEM86BQ8N661 226 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 OR4F17Q8NGA8 305 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 FXYD5Q96DB9 178 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 ZNF503Q96F45 646 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 NOL4LQ96MY1 436 aaPredicted RBP5.16□□□□□ -1.58
HDAC8-211ENST00000415409 SHANK2-AS3Q9BTD1 123 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 C20orf24Q9BUV8 137 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 GPR61Q9BZJ8 451 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 PARLQ9H300 379 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 GNB4Q9HAV0 340 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 SDF2L1Q9HCN8 221 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 YAE1D1Q9NRH1 226 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 RABAC1Q9UI14 185 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 CELSR1Q9NYQ6 3014 aa5.16□□□□□ -1.58
HDAC8-211ENST00000415409 SETD2Q9BYW2 2564 aaPredicted RBP5.15□□□□□ -1.58
HDAC8-211ENST00000415409 ITPR3Q14573 2671 aa5.15□□□□□ -1.58
HDAC8-211ENST00000415409 A0A087WWC5 75 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 H3BRN7 92 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 MT-ND4LP03901 98 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 GP9P14770 177 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 NPPCP23582 126 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 PPIFP30405 207 aaKnown RBP5.15□□□□□ -1.59
HDAC8-211ENST00000415409 ARL3P36405 182 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 SUMO1P63165 101 aaKnown RBP5.15□□□□□ -1.59
HDAC8-211ENST00000415409 SLC35B1P78383 322 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 ADIRFQ15847 76 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 SAPCD1Q5SSQ6 148 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 LEMD1Q68G75 181 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 TMEM88Q6PEY1 159 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 SIGLECL1Q8N7X8 197 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 C11orf52Q96A22 123 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 CHRDL1Q9BU40 450 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 TUBA4BQ9H853 241 aa5.15□□□□□ -1.59
HDAC8-211ENST00000415409 PGPA6NDG6 321 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 CXorf65A6NEN9 183 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 HELTA6NFD8 242 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 ZNF98A6NK75 572 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 GGTLC3B5MD39 225 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 TSPAN4O14817 238 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 RPL7P18124 248 aaKnown RBP5.14□□□□□ -1.59
HDAC8-211ENST00000415409 CRYBB3P26998 211 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 AKR1C3P42330 323 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 RAB9AP51151 201 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 CNN1P51911 297 aaKnown RBP5.14□□□□□ -1.59
HDAC8-211ENST00000415409 RANP62826 216 aaKnown RBP5.14□□□□□ -1.59
HDAC8-211ENST00000415409 RPL23P62829 140 aaKnown RBP5.14□□□□□ -1.59
HDAC8-211ENST00000415409 CFHR3Q02985 330 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 USF2Q15853 346 aaPredicted RBP5.14□□□□□ -1.59
HDAC8-211ENST00000415409 TOMM20LQ6UXN7 152 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 IL17RELQ6ZVW7 336 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 ZNF329Q86UD4 541 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 CBLN2Q8IUK8 224 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 BLNKQ8WV28 456 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 HIST1H2BAQ96A08 127 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 CCDC140Q96MF4 163 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 SPXQ9BT56 116 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 CTDSP1Q9GZU7 261 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 OTORQ9NRC9 128 aa5.14□□□□□ -1.59
HDAC8-211ENST00000415409 ARHGAP32A7KAX9 2087 aa5.13□□□□□ -1.59
HDAC8-211ENST00000415409 VPS13CQ709C8 3753 aa5.13□□□□□ -1.59
HDAC8-211ENST00000415409 TRBV19A0A075B6N1 114 aa5.13□□□□□ -1.59
HDAC8-211ENST00000415409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.13□□□□□ -1.59
HDAC8-211ENST00000415409 XKRY2A2RUG3 117 aa5.13□□□□□ -1.59
HDAC8-211ENST00000415409 PGPEP1LA6NFU8 196 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms