RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 C2orf70A6NJV1 201 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 CXorf1O96002 111 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 HBE1P02100 147 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 CBLN1P23435 193 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 BMI1P35226 326 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 KHDC3LQ587J8 217 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 C16orf54Q6UWD8 224 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 LCN15Q6UWW0 184 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 SUN5Q8TC36 379 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 ZNF503Q96F45 646 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 RHPN1-AS1Q9BWJ2 59 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 MAP1LC3BQ9GZQ8 125 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 TMEM231Q9H6L2 316 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 SIGLEC8Q9NYZ4 499 aa10.83□□□□□ -0.68
SF3B1-204ENST00000414963 TEX46H3BTG2 121 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 OVOL1O14753 267 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 CHEK1O14757 476 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 MRPS12O15235 138 aaKnown RBP10.82□□□□□ -0.68
SF3B1-204ENST00000414963 CSN3P07498 182 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 RPL7P18124 248 aaKnown RBP10.82□□□□□ -0.68
SF3B1-204ENST00000414963 PMS2P11Q13670 270 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 LEMD1Q68G75 181 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 ADAMTSL5Q6ZMM2 481 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 BPIFA4PQ86YQ2 179 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 LINC00482Q8N8I6 264 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 GLMPQ8WWB7 406 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 GRAMD2BQ96HH9 432 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 STAB1Q9NY15 2570 aa10.82□□□□□ -0.68
SF3B1-204ENST00000414963 HMGB3O15347 200 aaKnown RBP10.81□□□□□ -0.68
SF3B1-204ENST00000414963 EIF3GO75821 320 aaKnown RBP eCLIP10.81□□□□□ -0.68
SF3B1-204ENST00000414963 ARL14EPLP0DKL9 152 aa10.81□□□□□ -0.68
SF3B1-204ENST00000414963 FOLR2P14207 255 aa10.81□□□□□ -0.68
SF3B1-204ENST00000414963 GP9P14770 177 aa10.81□□□□□ -0.68
SF3B1-204ENST00000414963 OR8I2Q8N0Y5 310 aa10.81□□□□□ -0.68
SF3B1-204ENST00000414963 OR51M1Q9H341 326 aa10.81□□□□□ -0.68
SF3B1-204ENST00000414963 IGHV3-49A0A0A0MS15 119 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 PF4P02776 101 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 CD5P06127 495 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 IGLC2P0DOY2 106 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 GCHFRP30047 84 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 FXYD5Q96DB9 178 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 PAXXQ9BUH6 204 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 ELOVL1Q9BW60 279 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 TMEM167BQ9NRX6 74 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 SMAD5-AS1Q9Y6J3 95 aa10.8□□□□□ -0.68
SF3B1-204ENST00000414963 IGHV3OR16-13A0A075B7E8 117 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 IGHV3-74A0A0B4J1X5 117 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 IGHV3-66A0A0C4DH42 116 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 HELTA6NFD8 242 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 M0QZ24 198 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 OR7C2O60412 319 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 HIST1H1EP10412 219 aaKnown RBP10.79□□□□□ -0.68
SF3B1-204ENST00000414963 EDN2P20800 178 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 GALR1P47211 349 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 PSMB3P49720 205 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 PPT1P50897 306 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 FGF8P55075 233 aaPredicted RBP10.79□□□□□ -0.68
SF3B1-204ENST00000414963 CCL20P78556 96 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 FAM90A2PQ658T7 463 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 WFDC9Q8NEX5 89 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 PCNPQ8WW12 178 aaKnown RBP10.79□□□□□ -0.68
SF3B1-204ENST00000414963 MDFIQ99750 246 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 HRH4Q9H3N8 390 aa10.79□□□□□ -0.68
SF3B1-204ENST00000414963 A0A087X0K7 114 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 H3BQ15 152 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 NBEAP1P0C6P0 100 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 PYYP10082 97 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 MEOX2P50222 304 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 GUK1Q16774 197 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 SIGLEC15Q6ZMC9 328 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 C17orf77Q96MU5 243 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 TMPRSS5Q9H3S3 457 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 MLXQ9UH92 298 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 WNK1Q9H4A3 2382 aa10.78□□□□□ -0.68
SF3B1-204ENST00000414963 OR10J4P0C629 311 aa10.77□□□□□ -0.69
SF3B1-204ENST00000414963 UBE2L3P68036 154 aaKnown RBP10.77□□□□□ -0.69
SF3B1-204ENST00000414963 KRTAP21-3Q3LHN1 58 aa10.77□□□□□ -0.69
SF3B1-204ENST00000414963 MED9Q9NWA0 146 aa10.77□□□□□ -0.69
SF3B1-204ENST00000414963 ZNF586Q9NXT0 402 aa10.77□□□□□ -0.69
SF3B1-204ENST00000414963 ARL2-SNX15V9GYD0 113 aa10.77□□□□□ -0.69
SF3B1-204ENST00000414963 TRBV19A0A075B6N1 114 aa10.76□□□□□ -0.69
SF3B1-204ENST00000414963 ZNF253O75346 499 aa10.76□□□□□ -0.69
SF3B1-204ENST00000414963 ATF4P18848 351 aaPredicted RBP10.76□□□□□ -0.69
SF3B1-204ENST00000414963 PDE6HQ13956 83 aa10.76□□□□□ -0.69
SF3B1-204ENST00000414963 DEFB114Q30KQ6 69 aa10.76□□□□□ -0.69
SF3B1-204ENST00000414963 TCF24Q7RTU0 167 aa10.76□□□□□ -0.69
SF3B1-204ENST00000414963 VWFP04275 2813 aa10.76□□□□□ -0.69
SF3B1-204ENST00000414963 TRAV25A0A0B4J276 109 aa10.75□□□□□ -0.69
SF3B1-204ENST00000414963 A0A1B0GV50 99 aa10.75□□□□□ -0.69
SF3B1-204ENST00000414963 LINC00862A6NCI5 91 aa10.75□□□□□ -0.69
SF3B1-204ENST00000414963 ZNF785A8K8V0 405 aa10.75□□□□□ -0.69
SF3B1-204ENST00000414963 NDUFB4O95168 129 aa10.75□□□□□ -0.69
SF3B1-204ENST00000414963 TAGLN2P37802 199 aaKnown RBP10.75□□□□□ -0.69
SF3B1-204ENST00000414963 LYPD1Q8N2G4 141 aa10.75□□□□□ -0.69
SF3B1-204ENST00000414963 MANBALQ9NQG1 85 aa10.75□□□□□ -0.69
SF3B1-204ENST00000414963 A0A1W2PRE2 83 aa10.74□□□□□ -0.69
SF3B1-204ENST00000414963 INSL3P51460 131 aa10.74□□□□□ -0.69
SF3B1-204ENST00000414963 SAMD13Q5VXD3 122 aa10.74□□□□□ -0.69
SF3B1-204ENST00000414963 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.74□□□□□ -0.69
SF3B1-204ENST00000414963 IQCF2Q8IXL9 164 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms