RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 COQ8AQ8NI60 647 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 ENKURQ8TC29 256 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 OR10C1Q96KK4 312 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 B9D2Q9BPU9 175 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 TMPRSS5Q9H3S3 457 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 PALMDQ9NP74 551 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 BATF3Q9NR55 127 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 GSKIPQ9P0R6 139 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 UBQLN2Q9UHD9 624 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 UFC1Q9Y3C8 167 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 PUS1Q9Y606 427 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS41-205ENST00000414632 SMAD5-AS1Q9Y6J3 95 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 IGHV7-4-1A0A0J9YVY3 117 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 SYNGR2O43760 224 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 CLN5O75503 358 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 CCNKO75909 580 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 IFNA21P01568 189 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 OR10J1P30954 320 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 FCGR2BP31994 310 aaPredicted RBP3.63□□□□□ -1.83
VPS41-205ENST00000414632 ASAH1Q13510 395 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 OR2F1Q13607 317 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 IAH1Q2TAA2 248 aaPredicted RBP3.63□□□□□ -1.83
VPS41-205ENST00000414632 SPANXN5Q5MJ07 72 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 ZNF600Q6ZNG1 722 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 OR4X1Q8NH49 305 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 PHLDA1Q8WV24 401 aaPredicted RBP3.63□□□□□ -1.83
VPS41-205ENST00000414632 MITD1Q8WV92 249 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 RNF2Q99496 336 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 TXN2Q99757 166 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 RHPN1-AS1Q9BWJ2 59 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 RETNQ9HD89 108 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 DAZ1Q9NQZ3 744 aaKnown RBP3.63□□□□□ -1.83
VPS41-205ENST00000414632 SIGLEC8Q9NYZ4 499 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 TECRQ9NZ01 308 aaKnown RBP3.63□□□□□ -1.83
VPS41-205ENST00000414632 MRPL27Q9P0M9 148 aaKnown RBP3.63□□□□□ -1.83
VPS41-205ENST00000414632 RCL1Q9Y2P8 373 aaKnown RBP3.63□□□□□ -1.83
VPS41-205ENST00000414632 LSM5Q9Y4Y9 91 aaKnown RBP3.63□□□□□ -1.83
VPS41-205ENST00000414632 U3KQ87 197 aa3.63□□□□□ -1.83
VPS41-205ENST00000414632 IGLV5-45A0A087WSX0 123 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 TRAV14DV4A0A0A6YYC5 116 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 SMCO3A2RU48 225 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 OR11H12B2RN74 326 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 CHEK1O14757 476 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 MED6O75586 246 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 DFFBO76075 338 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 SIX6O95475 246 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 IGKV1-17P01599 117 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 IL4P05112 153 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 IGLC1P0CG04 106 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 C8orf88P0DMB2 117 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 SLC25A4P12235 298 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 SLC25A6P12236 298 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 RRAS2P62070 204 aaPredicted RBP3.62□□□□□ -1.83
VPS41-205ENST00000414632 RAB11AP62491 216 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 ZNF90Q03938 601 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 GAGE5Q13069 117 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 GAGE6Q13070 117 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 GAMTQ14353 236 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 OR8G2PQ6IF36 304 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 LINC00299Q6ZSB3 139 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 TCF24Q7RTU0 167 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 C12orf45Q8N5I9 185 aaPredicted RBP3.62□□□□□ -1.83
VPS41-205ENST00000414632 OR4D5Q8NGN0 318 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 OR1S2Q8NGQ3 325 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 OR2K2Q8NGT1 345 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 RNASEH2CQ8TDP1 164 aaKnown RBP3.62□□□□□ -1.83
VPS41-205ENST00000414632 ZNF431Q8TF32 576 aaPredicted RBP3.62□□□□□ -1.83
VPS41-205ENST00000414632 MARC2Q969Z3 335 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 SLC35E1Q96K37 410 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 GINS3Q9BRX5 216 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 ALKBH7Q9BT30 221 aaPredicted RBP3.62□□□□□ -1.83
VPS41-205ENST00000414632 PBDC1Q9BVG4 233 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 TUBA4BQ9H853 241 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 PSENENQ9NZ42 101 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 SMPXQ9UHP9 88 aa3.62□□□□□ -1.83
VPS41-205ENST00000414632 STAB2Q8WWQ8 2551 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 AGRNO00468 2067 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 CSMD3Q7Z407 3707 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 IGKV1D-37A0A075B6S9 117 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 TRAV30A0A087WSZ9 112 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 PIGBOS1A0A0B4J2F0 54 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 RBMY1BA6NDE4 496 aaKnown RBP3.61□□□□□ -1.83
VPS41-205ENST00000414632 RBMY1EA6NEQ0 496 aaKnown RBP3.61□□□□□ -1.83
VPS41-205ENST00000414632 ZFP92A6NM28 416 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 INMT-MINDY4F8WBC2 141 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 K7EMT4 169 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 GOSR2O14653 212 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 RBMY1DP0C7P1 496 aaKnown RBP3.61□□□□□ -1.83
VPS41-205ENST00000414632 METTL15P1P0C7V9 234 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 RPL35AP18077 110 aaKnown RBP3.61□□□□□ -1.83
VPS41-205ENST00000414632 NPPCP23582 126 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 GATA2P23769 480 aaPredicted RBP3.61□□□□□ -1.83
VPS41-205ENST00000414632 BCAP31P51572 246 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 PAX9P55771 341 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 S100A10P60903 97 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 LYZP61626 148 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 AKR1C1Q04828 323 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 OPCMLQ14982 345 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 USF2Q15853 346 aaPredicted RBP3.61□□□□□ -1.83
VPS41-205ENST00000414632 HAGHQ16775 308 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms