RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 ZNF506Q5JVG8 444 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 SLC25A30Q5SVS4 291 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 FRG2Q64ET8 278 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 ZNF324BQ6AW86 544 aaPredicted RBP3.15□□□□□ -1.91
LINC01048-201ENST00000414480 TMEM14EPQ6UXP3 125 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 ACP7Q6ZNF0 438 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 Q6ZPA2 131 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 C9orf139Q6ZV77 190 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 LINC00305Q7Z4B0 112 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 TMEM179BQ7Z7N9 219 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 GTSCR1Q86UQ5 136 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 C1orf174Q8IYL3 243 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 ZCCHC24Q8N2G6 241 aaKnown RBP3.15□□□□□ -1.91
LINC01048-201ENST00000414480 SLC22A24Q8N4F4 322 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 NUP35Q8NFH5 326 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 OR2A1Q8NGT9 310 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 NEUROG1Q92886 237 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 MS4A6EQ96DS6 147 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 RBMXL1Q96E39 390 aaKnown RBP3.15□□□□□ -1.91
LINC01048-201ENST00000414480 ZC2HC1AQ96GY0 325 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 CARD19Q96LW7 228 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 IGF2BP2-AS1Q96M15 143 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 LINC01587Q99440 93 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 EIF5A2Q9GZV4 153 aaKnown RBP3.15□□□□□ -1.91
LINC01048-201ENST00000414480 NDUFB11Q9NX14 153 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 C21orf62Q9NYP8 219 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 RARRES3Q9UL19 164 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 MPC1Q9Y5U8 109 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 CHCHD2Q9Y6H1 151 aaPredicted RBP3.15□□□□□ -1.91
LINC01048-201ENST00000414480 CCDC88CQ9P219 2028 aa3.15□□□□□ -1.91
LINC01048-201ENST00000414480 MYO7BQ6PIF6 2116 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 MUC21A0A0G2JKD1 596 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 IRGMA1A4Y4 181 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 A8MWV9 139 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 SHISA9B4DS77 424 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 H3BUT2 72 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 SS18L1O75177 396 aaPredicted RBP3.14□□□□□ -1.91
LINC01048-201ENST00000414480 IGKV1D-16P01601 117 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 FKBP2P26885 142 aaKnown RBP3.14□□□□□ -1.91
LINC01048-201ENST00000414480 RPL22P35268 128 aaKnown RBP3.14□□□□□ -1.91
LINC01048-201ENST00000414480 OPRM1P35372 400 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 CTRLP40313 264 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 POU3F1Q03052 451 aaPredicted RBP3.14□□□□□ -1.91
LINC01048-201ENST00000414480 ZNF85Q03923 595 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 DIAPH2-AS1Q14236 149 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 ZNF345Q14585 488 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 TMEM187Q14656 261 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 ZNF718Q3SXZ3 478 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 ABCA11PQ4W5N1 156 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 VAX1Q5SQQ9 334 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 BVES-AS1Q5T3Y7 98 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 Q5XG85 94 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 IGFL2Q6UWQ7 119 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 ZCCHC23Q6ZST2 131 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 C17orf82Q86X59 251 aaPredicted RBP3.14□□□□□ -1.91
LINC01048-201ENST00000414480 C9orf40Q8IXQ3 194 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 TOMM5Q8N4H5 51 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 NPWQ8N729 165 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 SIGLECL1Q8N7X8 197 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 PIFOQ8TCI5 191 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 TMEM255BQ8WV15 326 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 DDB2Q92466 427 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 SLC35B3Q9H1N7 401 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 SMDT1Q9H4I9 107 aa3.14□□□□□ -1.91
LINC01048-201ENST00000414480 C19orf25Q9UFG5 118 aaPredicted RBP3.14□□□□□ -1.91
LINC01048-201ENST00000414480 ZNF256Q9Y2P7 627 aaPredicted RBP3.14□□□□□ -1.91
LINC01048-201ENST00000414480 AMMECR1Q9Y4X0 333 aaPredicted RBP3.14□□□□□ -1.91
LINC01048-201ENST00000414480 NYNRINQ9P2P1 1898 aaKnown RBP3.13□□□□□ -1.91
LINC01048-201ENST00000414480 ZGRF1Q86YA3 2104 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 AKAP6Q13023 2319 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 TRBV19A0A075B6N1 114 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 TRAV4A0A0B4J268 109 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 MUC21A0A140T8X8 626 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 A0A1W2PPM0 123 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 RBMY1BA6NDE4 496 aaKnown RBP3.13□□□□□ -1.91
LINC01048-201ENST00000414480 RBMY1EA6NEQ0 496 aaKnown RBP3.13□□□□□ -1.91
LINC01048-201ENST00000414480 ZFP92A6NM28 416 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 SNRPGP15A8MWD9 76 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 RRHO14718 337 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 UBE2L6O14933 153 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 LMX1BO60663 402 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 PITX3O75364 302 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 NEURL1O76050 574 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 NDUFB6O95139 128 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 DUSP14O95147 198 aaKnown RBP3.13□□□□□ -1.91
LINC01048-201ENST00000414480 LYPD3O95274 346 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 IGLV3-27P01718 113 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 SLC25A5P05141 298 aaKnown RBP3.13□□□□□ -1.91
LINC01048-201ENST00000414480 CXCL1P09341 107 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 RBMY1DP0C7P1 496 aaKnown RBP3.13□□□□□ -1.91
LINC01048-201ENST00000414480 RBMY1A1P0DJD3 496 aaKnown RBP3.13□□□□□ -1.91
LINC01048-201ENST00000414480 ASIPP42127 132 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 RND2P52198 227 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 KRTDAPP60985 99 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 ELOCQ15369 112 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 RRN3P1Q2M238 152 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 MUC21Q5SSG8 566 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 PAQR4Q8N4S7 273 aaPredicted RBP3.13□□□□□ -1.91
LINC01048-201ENST00000414480 WFDC11Q8NEX6 87 aa3.13□□□□□ -1.91
LINC01048-201ENST00000414480 FDCSPQ8NFU4 85 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms