RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 HLA-DMBP28068 263 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 HBBP68871 147 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 HES3Q5TGS1 186 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 GOLT1AQ6ZVE7 132 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 GJC3Q8NFK1 279 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 RNASE7Q9H1E1 156 aaKnown RBP11.14□□□□□ -0.63
LINC00887-202ENST00000414120 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 CCL1P22362 96 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 GCHFRP30047 84 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 RPL13AP40429 203 aaKnown RBP11.14□□□□□ -0.63
LINC00887-202ENST00000414120 FOXC1Q12948 553 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 PTPRBP23467 1997 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 IGF2RP11717 2491 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 COX7CP15954 63 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 PRDX1Q06830 199 aaKnown RBP11.14□□□□□ -0.63
LINC00887-202ENST00000414120 C1orf195Q5TG92 126 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 LINC00336Q6ZUF6 198 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 STARD5Q9NSY2 213 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 TCF19Q9Y242 345 aa11.14□□□□□ -0.63
LINC00887-202ENST00000414120 TRBV25-1A0A075B6N4 114 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 TRAV2A0A0B4J234 112 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 FRG2CA6NGY1 282 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 PLGLB1Q02325 96 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 ZNF488Q96MN9 340 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 APC2O95996 2303 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 FRYQ5TBA9 3013 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 IGHV5-10-1A0A0J9YXX1 117 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 SPINK2P20155 84 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 TIRAPP58753 221 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 POM121L12Q8N7R1 296 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 C9orf85Q96MD7 179 aa11.13□□□□□ -0.63
LINC00887-202ENST00000414120 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
LINC00887-202ENST00000414120 F11RQ9Y624 299 aaKnown RBP11.13□□□□□ -0.63
LINC00887-202ENST00000414120 HEATR5BQ9P2D3 2071 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 TMED7-TICAM2A0A0A6YYA0 188 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 FAM236AA0A1B0GUQ0 79 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 FAM236BA0A1B0GV22 79 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 RBAKDNA6NC62 111 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 ENSAO43768 121 aaKnown RBP11.12□□□□□ -0.63
LINC00887-202ENST00000414120 ARL14EPLP0DKL9 152 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 ZNF793Q6ZN11 406 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 TRAV8-4A0A0B4J246 113 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 IGKV1-8A0A0C4DH67 115 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 HOXA3O43365 443 aaPredicted RBP11.12□□□□□ -0.63
LINC00887-202ENST00000414120 PGLYRP1O75594 196 aaPredicted RBP11.12□□□□□ -0.63
LINC00887-202ENST00000414120 PLA2G5P39877 138 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 RPL18Q07020 188 aaKnown RBP11.12□□□□□ -0.63
LINC00887-202ENST00000414120 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 ABHD12Q8N2K0 398 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 C3orf56Q8N813 242 aa11.12□□□□□ -0.63
LINC00887-202ENST00000414120 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 IGLV2-8P01709 118 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 FAM53BQ14153 422 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 FXYD3Q14802 87 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 Q6ZT83 130 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 DTX2Q86UW9 622 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 MAP1BP46821 2468 aaKnown RBP11.11□□□□□ -0.63
LINC00887-202ENST00000414120 IGKV1D-42A0A075B6H8 117 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 A0A0J9YW62 118 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 CD7P09564 240 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 CCL4P13236 92 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 RPS18P62269 152 aaKnown RBP11.11□□□□□ -0.63
LINC00887-202ENST00000414120 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 DGAT2L6Q6ZPD8 337 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 IGF2BP2-AS1Q96M15 143 aa11.11□□□□□ -0.63
LINC00887-202ENST00000414120 PMS2P5A8MQ11 134 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 DPM2O94777 84 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 NPYP01303 97 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 TRACP01848 142 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 IAPPP10997 89 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 RFESDQ8TAC1 157 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 TMEM150CB9EJG8 249 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 ZNF672Q499Z4 452 aaPredicted RBP11.1□□□□□ -0.63
LINC00887-202ENST00000414120 RNF44Q7L0R7 432 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 FLVCR1-AS1Q8TAF5 88 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 OCIAD1Q9NX40 245 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 PYGO1Q9Y3Y4 419 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 AKAP13Q12802 2813 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 ZNF823P16415 610 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 ZAR1Q86SH2 424 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 AMN1Q8IY45 258 aa11.1□□□□□ -0.63
LINC00887-202ENST00000414120 HDHD3Q9BSH5 251 aaPredicted RBP11.1□□□□□ -0.63
LINC00887-202ENST00000414120 LY6LH3BQJ8 138 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 NTN3O00634 580 aaPredicted RBP11.09□□□□□ -0.63
LINC00887-202ENST00000414120 CHEK1O14757 476 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 KISS1Q15726 138 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 RSPO1Q2MKA7 263 aaPredicted RBP11.09□□□□□ -0.63
LINC00887-202ENST00000414120 Q8N7P7 452 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 PILRAQ9UKJ1 303 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 WDR83OSQ9Y284 106 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 A0A0G2JRQ6 117 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 HAX1O00165 279 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
LINC00887-202ENST00000414120 PSMB2P49721 201 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 CT83Q5H943 113 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 FHL5Q5TD97 284 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 PRIMA1Q86XR5 153 aa11.09□□□□□ -0.63
LINC00887-202ENST00000414120 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms