RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 DYNLRB2Q8TF09 96 aa14.17□□□□□ -0.14
CDC42-204ENST00000411827 SEPSECSQ9HD40 501 aaKnown RBP14.17□□□□□ -0.14
CDC42-204ENST00000411827 TMEM14CQ9P0S9 112 aa14.17□□□□□ -0.14
CDC42-204ENST00000411827 NBEAL1Q6ZS30 2694 aa14.16□□□□□ -0.14
CDC42-204ENST00000411827 ZNF207O43670 478 aaKnown RBP14.16□□□□□ -0.14
CDC42-204ENST00000411827 GCSAMLQ5JQS6 135 aa14.16□□□□□ -0.14
CDC42-204ENST00000411827 RAB24Q969Q5 203 aa14.16□□□□□ -0.14
CDC42-204ENST00000411827 SAT2Q96F10 170 aaPredicted RBP14.16□□□□□ -0.14
CDC42-204ENST00000411827 UHRF2Q96PU4 802 aa14.16□□□□□ -0.14
CDC42-204ENST00000411827 ZMAT5Q9UDW3 170 aaKnown RBP14.16□□□□□ -0.14
CDC42-204ENST00000411827 BLOC1S1P78537 153 aa14.15□□□□□ -0.14
CDC42-204ENST00000411827 GUK1Q16774 197 aa14.15□□□□□ -0.14
CDC42-204ENST00000411827 FAM122CQ6P4D5 195 aa14.15□□□□□ -0.14
CDC42-204ENST00000411827 ALKAL2Q6UX46 152 aa14.15□□□□□ -0.14
CDC42-204ENST00000411827 ZNF680Q8NEM1 530 aa14.15□□□□□ -0.14
CDC42-204ENST00000411827 GLMPQ8WWB7 406 aa14.15□□□□□ -0.14
CDC42-204ENST00000411827 SCRT1Q9BWW7 348 aa14.15□□□□□ -0.14
CDC42-204ENST00000411827 RFNGQ9Y644 331 aa14.15□□□□□ -0.14
CDC42-204ENST00000411827 SAP30O75446 220 aa14.14□□□□□ -0.15
CDC42-204ENST00000411827 CXorf1O96002 111 aa14.14□□□□□ -0.15
CDC42-204ENST00000411827 PAFAH1B2P68402 229 aa14.14□□□□□ -0.15
CDC42-204ENST00000411827 SIGLEC15Q6ZMC9 328 aa14.14□□□□□ -0.15
CDC42-204ENST00000411827 ZNF767PQ75MW2 155 aa14.14□□□□□ -0.15
CDC42-204ENST00000411827 MBD3L1Q8WWY6 194 aa14.14□□□□□ -0.15
CDC42-204ENST00000411827 UBQLN2Q9UHD9 624 aa14.14□□□□□ -0.15
CDC42-204ENST00000411827 TRAV2A0A0B4J234 112 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 TRAV1-1A0A0B4J248 108 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 WIPF1O43516 503 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 HBE1P02100 147 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 H2AFB1P0C5Y9 115 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 STAG3L2P0CL84 134 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 STAG3L3P0CL85 134 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 DEFB114Q30KQ6 69 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 MIR17HGQ75NE6 70 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 FAM213BQ8TBF2 198 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 SLC25A22Q9H936 323 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 WNK1Q9H4A3 2382 aa14.13□□□□□ -0.15
CDC42-204ENST00000411827 IGLV1-51P01701 117 aa14.12□□□□□ -0.15
CDC42-204ENST00000411827 APOHP02749 345 aaPredicted RBP14.12□□□□□ -0.15
CDC42-204ENST00000411827 HIST1H1EP10412 219 aaKnown RBP14.12□□□□□ -0.15
CDC42-204ENST00000411827 ATF4P18848 351 aaPredicted RBP14.12□□□□□ -0.15
CDC42-204ENST00000411827 FAM90A2PQ658T7 463 aa14.12□□□□□ -0.15
CDC42-204ENST00000411827 LCN12Q6JVE5 192 aa14.12□□□□□ -0.15
CDC42-204ENST00000411827 ADAMTSL5Q6ZMM2 481 aa14.12□□□□□ -0.15
CDC42-204ENST00000411827 RBPMS2Q6ZRY4 209 aaKnown RBP14.12□□□□□ -0.15
CDC42-204ENST00000411827 TCF24Q7RTU0 167 aa14.12□□□□□ -0.15
CDC42-204ENST00000411827 FAM167A-AS1Q96KT0 104 aa14.12□□□□□ -0.15
CDC42-204ENST00000411827 OR51M1Q9H341 326 aa14.12□□□□□ -0.15
CDC42-204ENST00000411827 TMEM167BQ9NRX6 74 aa14.12□□□□□ -0.15
CDC42-204ENST00000411827 CLEC5AQ9NY25 188 aa14.12□□□□□ -0.15
CDC42-204ENST00000411827 A0A087X0K7 114 aa14.11□□□□□ -0.15
CDC42-204ENST00000411827 IGHV3-49A0A0A0MS15 119 aa14.11□□□□□ -0.15
CDC42-204ENST00000411827 ZNF705EA8MWA4 302 aaPredicted RBP14.11□□□□□ -0.15
CDC42-204ENST00000411827 TSPAN4O14817 238 aa14.11□□□□□ -0.15
CDC42-204ENST00000411827 OR7C2O60412 319 aa14.11□□□□□ -0.15
CDC42-204ENST00000411827 PPT1P50897 306 aa14.11□□□□□ -0.15
CDC42-204ENST00000411827 PDE6HQ13956 83 aa14.11□□□□□ -0.15
CDC42-204ENST00000411827 SPAG8Q99932 426 aaPredicted RBP14.11□□□□□ -0.15
CDC42-204ENST00000411827 PAXXQ9BUH6 204 aa14.11□□□□□ -0.15
CDC42-204ENST00000411827 HRH4Q9H3N8 390 aa14.11□□□□□ -0.15
CDC42-204ENST00000411827 MLXQ9UH92 298 aa14.11□□□□□ -0.15
CDC42-204ENST00000411827 MAP1LC3B2A6NCE7 125 aa14.1□□□□□ -0.15
CDC42-204ENST00000411827 ZNF785A8K8V0 405 aa14.1□□□□□ -0.15
CDC42-204ENST00000411827 ZNF253O75346 499 aa14.1□□□□□ -0.15
CDC42-204ENST00000411827 RPL11P62913 178 aaKnown RBP14.1□□□□□ -0.15
CDC42-204ENST00000411827 LEMD1Q68G75 181 aa14.1□□□□□ -0.15
CDC42-204ENST00000411827 SFT2D1Q8WV19 159 aa14.1□□□□□ -0.15
CDC42-204ENST00000411827 SLC25A2Q9BXI2 301 aa14.1□□□□□ -0.15
CDC42-204ENST00000411827 MAP1LC3BQ9GZQ8 125 aa14.1□□□□□ -0.15
CDC42-204ENST00000411827 NRN1Q9NPD7 142 aa14.1□□□□□ -0.15
CDC42-204ENST00000411827 PLA2G2EQ9NZK7 142 aa14.1□□□□□ -0.15
CDC42-204ENST00000411827 IGHV3OR16-13A0A075B7E8 117 aa14.09□□□□□ -0.15
CDC42-204ENST00000411827 IGHV3-74A0A0B4J1X5 117 aa14.09□□□□□ -0.15
CDC42-204ENST00000411827 IGHV3-66A0A0C4DH42 116 aa14.09□□□□□ -0.15
CDC42-204ENST00000411827 GP9P14770 177 aa14.09□□□□□ -0.15
CDC42-204ENST00000411827 PSMB3P49720 205 aa14.09□□□□□ -0.15
CDC42-204ENST00000411827 CMC4P56277 68 aaPredicted RBP14.09□□□□□ -0.15
CDC42-204ENST00000411827 RAB14P61106 215 aa14.09□□□□□ -0.15
CDC42-204ENST00000411827 MORN5Q5VZ52 161 aa14.09□□□□□ -0.15
CDC42-204ENST00000411827 SPATA31B1PQ5VZV4 182 aa14.09□□□□□ -0.15
CDC42-204ENST00000411827 LCN15Q6UWW0 184 aa14.09□□□□□ -0.15
CDC42-204ENST00000411827 TRAV5A0A0B4J249 113 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 MRPS12O15235 138 aaKnown RBP14.08□□□□□ -0.16
CDC42-204ENST00000411827 NBEAP1P0C6P0 100 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 ARL14EPLP0DKL9 152 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 IGLC2P0DOY2 106 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 FHITP49789 147 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 PMS2P11Q13670 270 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 ZNF726P1Q15940 193 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 FAM74A1Q5RGS3 127 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 LYPD1Q8N2G4 141 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 SLC50A1Q9BRV3 221 aa14.08□□□□□ -0.16
CDC42-204ENST00000411827 OR4C46A6NHA9 309 aa14.07□□□□□ -0.16
CDC42-204ENST00000411827 GCHFRP30047 84 aa14.07□□□□□ -0.16
CDC42-204ENST00000411827 UBE2L3P68036 154 aaKnown RBP14.07□□□□□ -0.16
CDC42-204ENST00000411827 CD300EQ496F6 205 aaPredicted RBP14.07□□□□□ -0.16
CDC42-204ENST00000411827 SUN5Q8TC36 379 aa14.07□□□□□ -0.16
CDC42-204ENST00000411827 NKX6-2Q9C056 277 aaPredicted RBP14.07□□□□□ -0.16
CDC42-204ENST00000411827 ARL2-SNX15V9GYD0 113 aa14.07□□□□□ -0.16
CDC42-204ENST00000411827 DNASE2O00115 360 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms