RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 NPIPB6E9PJ23 425 aa18.82■□□□□ 0.6
PMS1-205ENST00000409985 CNIH1O95406 144 aa18.82■□□□□ 0.6
PMS1-205ENST00000409985 AMTP48728 403 aa18.82■□□□□ 0.6
PMS1-205ENST00000409985 LYZP61626 148 aa18.82■□□□□ 0.6
PMS1-205ENST00000409985 SHANK2-AS3Q9BTD1 123 aa18.82■□□□□ 0.6
PMS1-205ENST00000409985 NBPF19A0A087WUL8 3843 aa18.82■□□□□ 0.6
PMS1-205ENST00000409985 PRR27Q6MZM9 219 aa18.82■□□□□ 0.6
PMS1-205ENST00000409985 KIR3DL3Q8N743 410 aa18.82■□□□□ 0.6
PMS1-205ENST00000409985 FBXL7Q9UJT9 491 aa18.82■□□□□ 0.6
PMS1-205ENST00000409985 FBN2P35556 2912 aa18.81■□□□□ 0.6
PMS1-205ENST00000409985 APELAP0DMC3 54 aa18.81■□□□□ 0.6
PMS1-205ENST00000409985 LDLRAD2Q5SZI1 272 aa18.81■□□□□ 0.6
PMS1-205ENST00000409985 RCHY1Q96PM5 261 aa18.81■□□□□ 0.6
PMS1-205ENST00000409985 MIEN1Q9BRT3 115 aa18.81■□□□□ 0.6
PMS1-205ENST00000409985 VAMP8Q9BV40 100 aa18.81■□□□□ 0.6
PMS1-205ENST00000409985 TACC2O95359 2948 aa18.81■□□□□ 0.6
PMS1-205ENST00000409985 IGHV3-21A0A0B4J1V1 117 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 A0A1B0GV90 55 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 M0QZK8 103 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 M0R143 59 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 P01737 135 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 GPR6P46095 362 aaPredicted RBP18.8■□□□□ 0.6
PMS1-205ENST00000409985 BPIFA4PQ86YQ2 179 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 LOC105371242A0A075B767 164 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 H3BRN7 92 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 CDKN1AP38936 164 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 HBBP68871 147 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 GDF5OSQ5U4N7 250 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 CCDC144NLQ6NUI1 221 aa18.8■□□□□ 0.6
PMS1-205ENST00000409985 DAZAP1Q96EP5 407 aaKnown RBP18.8■□□□□ 0.6
PMS1-205ENST00000409985 ALKBH7Q9BT30 221 aaPredicted RBP18.8■□□□□ 0.6
PMS1-205ENST00000409985 CENPEQ02224 2701 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 NPIPB5A8MRT5 1133 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 SNRPCP09234 159 aaKnown RBP18.79■□□□□ 0.6
PMS1-205ENST00000409985 RAB4AP20338 218 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 COL8A1P27658 744 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 DMRTA1Q5VZB9 504 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 CYB5R2Q6BCY4 276 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 C16orf54Q6UWD8 224 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 Q86TA4 180 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 Q8N976 141 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 VN1R17PQ8TDU5 208 aa18.79■□□□□ 0.6
PMS1-205ENST00000409985 GSX1Q9H4S2 264 aaPredicted RBP18.79■□□□□ 0.6
PMS1-205ENST00000409985 A0A1W2PPR1 153 aa18.78■□□□□ 0.6
PMS1-205ENST00000409985 PLXNB1O43157 2135 aa18.78■□□□□ 0.6
PMS1-205ENST00000409985 TRBV19A0A075B6N1 114 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 WI2-2373I1.2A0A1W2PRP0 233 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 DIRC3C9JPN6 131 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 CD33P20138 364 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 ARF6P62330 175 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 C5orf64Q2M2E5 130 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 RBPMS2Q6ZRY4 209 aaKnown RBP18.77■□□□□ 0.6
PMS1-205ENST00000409985 NIT1Q86X76 327 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 OR4F17Q8NGA8 305 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 PSMG3-AS1Q96PY0 264 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 ZFP30Q9Y2G7 519 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 FOXA3P55318 350 aaPredicted RBP18.77■□□□□ 0.6
PMS1-205ENST00000409985 PRB3Q04118 309 aaPredicted RBP18.77■□□□□ 0.6
PMS1-205ENST00000409985 LEMD1Q68G75 181 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 TMEM75Q8N9X5 138 aa18.77■□□□□ 0.6
PMS1-205ENST00000409985 PTPN13Q12923 2485 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 VWC2LB2RUY7 222 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 IGLC2P0DOY2 106 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 EBI3Q14213 229 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 MINOS1Q5TGZ0 78 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 ZNF562Q6V9R5 426 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 DTX2Q86UW9 622 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 ZNF491Q8N8L2 437 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 MINOS1-NBL1R4GNA1 71 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 CSMD2Q7Z408 3487 aa18.76■□□□□ 0.59
PMS1-205ENST00000409985 IGLV2-11P01706 119 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 KRTDAPP60985 99 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 LINC00322Q6ZN03 302 aaPredicted RBP18.75■□□□□ 0.59
PMS1-205ENST00000409985 ARL6IP6Q8N6S5 226 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 IGFBPL1Q8WX77 278 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 FAM103A1Q9BTL3 118 aaKnown RBP18.75■□□□□ 0.59
PMS1-205ENST00000409985 SNHG12Q9BXW3 62 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 RPH3ALQ9UNE2 315 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 K7EQM0 130 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 PDE6HQ13956 83 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 BORCS7Q96B45 105 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 RNF125Q96EQ8 232 aa18.75■□□□□ 0.59
PMS1-205ENST00000409985 PMCHP20382 165 aa18.74■□□□□ 0.59
PMS1-205ENST00000409985 TTC9CQ8N5M4 171 aa18.74■□□□□ 0.59
PMS1-205ENST00000409985 SPOCK3Q9BQ16 436 aa18.74■□□□□ 0.59
PMS1-205ENST00000409985 IGLV11-55A0A075B6I3 123 aa18.73■□□□□ 0.59
PMS1-205ENST00000409985 NUTF2P61970 127 aaKnown RBP18.73■□□□□ 0.59
PMS1-205ENST00000409985 GTSF1Q8WW33 167 aa18.73■□□□□ 0.59
PMS1-205ENST00000409985 EREGO14944 169 aa18.73■□□□□ 0.59
PMS1-205ENST00000409985 MRPS12O15235 138 aaKnown RBP18.73■□□□□ 0.59
PMS1-205ENST00000409985 MFAP4P55083 255 aa18.73■□□□□ 0.59
PMS1-205ENST00000409985 Q8N6K4 173 aa18.73■□□□□ 0.59
PMS1-205ENST00000409985 RNF114Q9Y508 228 aa18.73■□□□□ 0.59
PMS1-205ENST00000409985 HILPDAQ9Y5L2 63 aa18.73■□□□□ 0.59
PMS1-205ENST00000409985 SERTM2A0A1B0GWG4 89 aa18.72■□□□□ 0.59
PMS1-205ENST00000409985 HSBP1O75506 76 aa18.72■□□□□ 0.59
PMS1-205ENST00000409985 C3orf79P0CE67 100 aa18.72■□□□□ 0.59
PMS1-205ENST00000409985 CTRLP40313 264 aa18.72■□□□□ 0.59
PMS1-205ENST00000409985 TDRG1Q3Y452 100 aa18.72■□□□□ 0.59
PMS1-205ENST00000409985 SIGLEC15Q6ZMC9 328 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms