RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 OR8B3Q8NGG8 313 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 OR8B2Q96RD0 313 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 KIR2DL5BA0A0G2JN68 375 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 KIR2DL5BA0A0G2JPC4 375 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 HSBP1L1C9JCN9 74 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 M0R2Z0 102 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 APOBEC3AP31941 199 aaPredicted RBP10.75□□□□□ -0.69
COL6A2-204ENST00000409416 CFHR2P36980 270 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 CDKN1BP46527 198 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 SELENOTP62341 195 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 C1orf174Q8IYL3 243 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 KIR2DL5AQ8N109 375 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 STPG4Q8N801 248 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 COL25A1Q9BXS0 654 aaPredicted RBP10.75□□□□□ -0.69
COL6A2-204ENST00000409416 PEX7O00628 323 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 C2orf83Q53S99 150 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 Q71RC1 249 aaPredicted RBP10.75□□□□□ -0.69
COL6A2-204ENST00000409416 KCNS1Q96KK3 526 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 C17orf77Q96MU5 243 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 CLUHP3Q96NS8 147 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 OSTCQ9NRP0 149 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 ZNF257Q9Y2Q1 563 aa10.75□□□□□ -0.69
COL6A2-204ENST00000409416 PRRX1P54821 245 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 CIARTQ8N365 385 aaPredicted RBP10.74□□□□□ -0.69
COL6A2-204ENST00000409416 IGHV2-26A0A0B4J1V2 119 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 OR2T8A6NH00 312 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 HIGD1CA8MV81 97 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 HLA-DQA1P01909 254 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 COL8A1P27658 744 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 BRD3OSQ6XYD6 125 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 RAI1Q7Z5J4 1906 aaPredicted RBP10.74□□□□□ -0.69
COL6A2-204ENST00000409416 MT-ND6P03923 174 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 C3orf79P0CE67 100 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 CR1LQ2VPA4 569 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 OSR1Q8TAX0 266 aaPredicted RBP10.74□□□□□ -0.69
COL6A2-204ENST00000409416 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
COL6A2-204ENST00000409416 TMEM133Q9H2Q1 129 aa10.74□□□□□ -0.69
COL6A2-204ENST00000409416 A0A1W2PRE2 83 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 SPRY2O43597 315 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 ZNF324O75467 553 aaPredicted RBP10.73□□□□□ -0.69
COL6A2-204ENST00000409416 TMEM177Q53S58 311 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 IGFL2Q6UWQ7 119 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 BET1LQ9NYM9 111 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 HYPMO75409 117 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 NBEAP1P0C6P0 100 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 NRGNQ92686 78 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 CLEC7AQ9BXN2 247 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 ARL2-SNX15V9GYD0 113 aa10.73□□□□□ -0.69
COL6A2-204ENST00000409416 PRRC2AP48634 2157 aaKnown RBP10.73□□□□□ -0.69
COL6A2-204ENST00000409416 CHEK1O14757 476 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 LCNL1Q6ZST4 164 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 NDUFA4L2Q9NRX3 87 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 IZUMO1RA6ND01 250 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 PAX1P15863 534 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 NUP35Q8NFH5 326 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 TSKUQ8WUA8 353 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 TRAV9-1A0A075B6T8 112 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 TRBV9A0A0B4J1U6 114 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 FBLN7Q53RD9 439 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 TEX43Q6ZNM6 134 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 PPP1R27Q86WC6 154 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 VSTM2AQ8TAG5 236 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 CFAP46Q8IYW2 2715 aa10.72□□□□□ -0.69
COL6A2-204ENST00000409416 FCN3O75636 299 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 IGLV2-8P01709 118 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 PSG1P11464 419 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 HTR1DP28221 377 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 Q0VG73 95 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 PATE2Q6UY27 113 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 BCL6BQ8N143 479 aaPredicted RBP10.71□□□□□ -0.69
COL6A2-204ENST00000409416 OR4B1Q8NGF8 309 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 FAM167A-AS1Q96KT0 104 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 RAB1BQ9H0U4 201 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 C22orf46C9J442 243 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 IGHV3-11P01762 117 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 UBE2V1Q13404 147 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 ZNF329Q86UD4 541 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 Q8TAT8 98 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 TP73-AS1Q9UF72 201 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 LY96Q9Y6Y9 160 aa10.71□□□□□ -0.69
COL6A2-204ENST00000409416 TCRBV4S1A1TA0A5B7 111 aa10.71□□□□□ -0.7
COL6A2-204ENST00000409416 SHISA9B4DS77 424 aa10.71□□□□□ -0.7
COL6A2-204ENST00000409416 GATA4P43694 442 aa10.71□□□□□ -0.7
COL6A2-204ENST00000409416 DUX5Q96PT3 197 aa10.71□□□□□ -0.7
COL6A2-204ENST00000409416 MRPL32Q9BYC8 188 aaKnown RBP10.71□□□□□ -0.7
COL6A2-204ENST00000409416 HIF1ANQ9NWT6 349 aa10.71□□□□□ -0.7
COL6A2-204ENST00000409416 LAMTOR2Q9Y2Q5 125 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 IGHV1-3A0A0C4DH29 117 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 SRD5A1P18405 259 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 POU2AF1Q16633 256 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 HIST2H2BDQ6DRA6 164 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 MEGF9Q9H1U4 602 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 HECTD1Q9ULT8 2610 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 ZNF785A8K8V0 405 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 HIST1H1EP10412 219 aaKnown RBP10.7□□□□□ -0.7
COL6A2-204ENST00000409416 ZNF833PQ6ZTB9 187 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 C18orf32Q8TCD1 76 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 CACNG8Q8WXS5 425 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 PERPQ96FX8 193 aa10.7□□□□□ -0.7
COL6A2-204ENST00000409416 IGF2BP2-AS1Q96M15 143 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms