RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 TCF24Q7RTU0 167 aa10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 PCNPQ8WW12 178 aaKnown RBP10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 NARS2Q96I59 477 aaKnown RBP10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 SHANK2-AS3Q9BTD1 123 aa10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 PKD1L1Q8TDX9 2849 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 FHITP49789 147 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 ACOT6Q3I5F7 207 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 C9orf66Q5T8R8 295 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 DPPA3Q6W0C5 159 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 WFDC3Q8IUB2 231 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 TMEM61Q8N0U2 210 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 OR8I2Q8N0Y5 310 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 OR10G4Q8NGN3 311 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 OR10G9Q8NGN4 311 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 OR10G7Q8NGN6 311 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 PFDN5Q99471 154 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 RPRMQ9NS64 109 aa10.64□□□□□ -0.71
CHRNA1-204ENST00000409323 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
CHRNA1-204ENST00000409323 H3BTX0 84 aa10.63□□□□□ -0.71
CHRNA1-204ENST00000409323 PRB4P10163 310 aaPredicted RBP10.63□□□□□ -0.71
CHRNA1-204ENST00000409323 M6PRP20645 277 aa10.63□□□□□ -0.71
CHRNA1-204ENST00000409323 AKR1C8PQ5T2L2 129 aa10.63□□□□□ -0.71
CHRNA1-204ENST00000409323 C16orf54Q6UWD8 224 aa10.63□□□□□ -0.71
CHRNA1-204ENST00000409323 SSX7Q7RTT5 188 aa10.63□□□□□ -0.71
CHRNA1-204ENST00000409323 GLMPQ8WWB7 406 aa10.63□□□□□ -0.71
CHRNA1-204ENST00000409323 MARC2Q969Z3 335 aa10.63□□□□□ -0.71
CHRNA1-204ENST00000409323 A0A1W2PS18 150 aa10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 ZNF705EA8MWA4 302 aaPredicted RBP10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 IGLV1-51P01701 117 aa10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 GUCA2BQ16661 112 aa10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 TMEM41BQ5BJD5 291 aa10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 PXDC1Q5TGL8 231 aa10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 RPP25LQ8N5L8 163 aaKnown RBP10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 STXBP6Q8NFX7 210 aa10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 GATAD1Q8WUU5 269 aa10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 SORL1Q92673 2214 aa10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 DNHD1Q96M86 4753 aa10.62□□□□□ -0.71
CHRNA1-204ENST00000409323 RAB19A4D1S5 217 aa10.61□□□□□ -0.71
CHRNA1-204ENST00000409323 PYYP10082 97 aa10.61□□□□□ -0.71
CHRNA1-204ENST00000409323 SIGLEC15Q6ZMC9 328 aa10.61□□□□□ -0.71
CHRNA1-204ENST00000409323 COMMD7Q86VX2 200 aa10.61□□□□□ -0.71
CHRNA1-204ENST00000409323 GRAMD2BQ96HH9 432 aa10.61□□□□□ -0.71
CHRNA1-204ENST00000409323 MCRIP2Q9BUT9 160 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-204ENST00000409323 SLC25A2Q9BXI2 301 aa10.61□□□□□ -0.71
CHRNA1-204ENST00000409323 FUT9Q9Y231 359 aa10.61□□□□□ -0.71
CHRNA1-204ENST00000409323 SMAD5-AS1Q9Y6J3 95 aa10.61□□□□□ -0.71
CHRNA1-204ENST00000409323 TRAV1-1A0A0B4J248 108 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 A0A1B0GV50 99 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 A0A1W2PPV4 95 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 OR10J4P0C629 311 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 CDC34P49427 236 aaPredicted RBP10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 ZNF726P1Q15940 193 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 FAM90A2PQ658T7 463 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 RBPMS2Q6ZRY4 209 aaKnown RBP10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 C17orf77Q96MU5 243 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 TMEM231Q9H6L2 316 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 SIGLEC8Q9NYZ4 499 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 PFDN2Q9UHV9 154 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 PRB2P02812 416 aaPredicted RBP10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 BMI1P35226 326 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 FGF8P55075 233 aaPredicted RBP10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 RHOBP62745 196 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 IGFL4Q6B9Z1 124 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 FAM213BQ8TBF2 198 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 RAB24Q969Q5 203 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 FAM167A-AS1Q96KT0 104 aa10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 TECRQ9NZ01 308 aaKnown RBP10.6□□□□□ -0.71
CHRNA1-204ENST00000409323 ZNF785A8K8V0 405 aa10.59□□□□□ -0.71
CHRNA1-204ENST00000409323 OR7C2O60412 319 aa10.59□□□□□ -0.71
CHRNA1-204ENST00000409323 KRTAP10-11P60412 298 aa10.59□□□□□ -0.71
CHRNA1-204ENST00000409323 UQCC3Q6UW78 93 aa10.59□□□□□ -0.71
CHRNA1-204ENST00000409323 LCN15Q6UWW0 184 aa10.59□□□□□ -0.71
CHRNA1-204ENST00000409323 FAM24BQ8N5W8 94 aa10.59□□□□□ -0.71
CHRNA1-204ENST00000409323 ZNF503Q96F45 646 aa10.59□□□□□ -0.71
CHRNA1-204ENST00000409323 MS4A6AQ9H2W1 248 aa10.59□□□□□ -0.71
CHRNA1-204ENST00000409323 H3BQ15 152 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 DNASE2O00115 360 aaPredicted RBP10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 MRPS12O15235 138 aaKnown RBP10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 MBP02144 154 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 INSL3P51460 131 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 PMS2P11Q13670 270 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 C1orf194Q5T5A4 169 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 SAMD5Q5TGI4 173 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 BLNKQ8WV28 456 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 MBD3L1Q8WWY6 194 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 PRR25Q96S07 402 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 MRPL32Q9BYC8 188 aaKnown RBP10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 ACTR3CQ9C0K3 210 aaPredicted RBP10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 CMYA5Q8N3K9 4069 aa10.58□□□□□ -0.72
CHRNA1-204ENST00000409323 ARL14EPLP0DKL9 152 aa10.57□□□□□ -0.72
CHRNA1-204ENST00000409323 GP9P14770 177 aa10.57□□□□□ -0.72
CHRNA1-204ENST00000409323 RPL7P18124 248 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-204ENST00000409323 ATF4P18848 351 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-204ENST00000409323 GALR1P47211 349 aa10.57□□□□□ -0.72
CHRNA1-204ENST00000409323 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
CHRNA1-204ENST00000409323 BPIFA4PQ86YQ2 179 aa10.57□□□□□ -0.72
CHRNA1-204ENST00000409323 CITED4Q96RK1 184 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms