RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 NDUFA6P56556 154 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 C5orf56Q8N8D9 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 FAM110DQ8TAY7 271 aaPredicted RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 FRZBQ92765 325 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 ANKRD17O75179 2603 aaKnown RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 KRTAP9-6A0A140TA67 174 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 H3BUX3 64 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 AP4M1O00189 453 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 ISLRO14498 428 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 TRGC1P0CF51 173 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 PRB4P10163 310 aaPredicted RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 SLC25A16P16260 332 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 YPEL3P61236 119 aaPredicted RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 RHOGP84095 191 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 USF2Q15853 346 aaPredicted RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 C15orf32Q32M92 178 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 BAGE2Q86Y30 109 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 C17orf77Q96MU5 243 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 PYGO2Q9BRQ0 406 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 CHRDL1Q9BU40 450 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 RNASE7Q9H1E1 156 aaKnown RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 MEGF9Q9H1U4 602 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 Q9H3A6 140 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 SRD5A3Q9H8P0 318 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 ZNF586Q9NXT0 402 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 EPDR1Q9UM22 224 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 MOB4Q9Y3A3 225 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 LY96Q9Y6Y9 160 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 ZNF98A6NK75 572 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 TGOLN2O43493 480 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 GGCTO75223 188 aaKnown RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 TGFAP01135 160 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 IGLV2-8P01709 118 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 CLEC3BP05452 202 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 CTSGP08311 255 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H1EP10412 219 aaKnown RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 HIST1H1BP16401 226 aaKnown RBP3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 GPR183P32249 361 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 MYCNOSP40205 109 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 TAS2R60P59551 318 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 UBE2G1P62253 170 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 BPIFA4PQ86YQ2 179 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 EXOC3-AS1Q8N2X6 119 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 OR4F17Q8NGA8 305 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 TMEM68Q96MH6 324 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 SHANK2-AS3Q9BTD1 123 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 GNB4Q9HAV0 340 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 SERTAD4Q9NUC0 356 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 CDC42EP3Q9UKI2 254 aa3.11□□□□□ -1.91
LRRTM4-201ENST00000409088 WI2-2373I1.2A0A1W2PRP0 233 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 H3BRN7 92 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 TNFRSF6BO95407 300 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 AMY1AP04745 511 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 ADMP35318 185 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 FOXL1Q12952 345 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 PRR27Q6MZM9 219 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 CLEC19AQ6UXS0 136 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 LINC01356Q8N9X3 169 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 CMTM2Q8TAZ6 248 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 IGF2BP2-AS1Q96M15 143 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 TRAV41A0A0B4J266 112 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 UBE2CO00762 179 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 SPINK4O60575 86 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 SCGB2A1O75556 95 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 GCGP01275 180 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 PAX1P15863 534 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 BLCAPP62952 87 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 PDZD11Q5EBL8 140 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 IBA57Q5T440 356 aaKnown RBP3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 KRTAP19-1Q8IUB9 90 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 C5orf17Q8NAS9 161 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 VN1R17PQ8TDU5 208 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 ZNF48Q96MX3 618 aaPredicted RBP3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 IL36BQ9NZH7 164 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 TMEM14CQ9P0S9 112 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 V9GYV3 84 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 CHD6Q8TD26 2715 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 ZNF705GA8MUZ8 300 aaPredicted RBP3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 TCRAP04437 139 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 S100A9P06702 114 aaKnown RBP3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 BTF3P20290 206 aaKnown RBP3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 TCL1AP56279 114 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 SLC35B1P78383 322 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 RPEL1Q2QD12 228 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 WDR73Q6P4I2 378 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 OR8I2Q8N0Y5 310 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 ZNF502Q8TBZ5 544 aa3.1□□□□□ -1.91
LRRTM4-201ENST00000409088 NOL4LQ96MY1 436 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms