RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 PRADC1Q9BSG0 188 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 EDA2RQ9HAV5 297 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 RTTNQ86VV8 2226 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 IL18BPO95998 194 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 VDAC2P45880 294 aaPredicted RBP10.59□□□□□ -0.71
RNF43-201ENST00000407977 FAM231DQ6ZW35 169 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 TIMM21Q9BVV7 248 aa10.59□□□□□ -0.71
RNF43-201ENST00000407977 A0A0G2JRQ6 117 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 Q6ZRM9 215 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 RALGAPA1Q6GYQ0 2036 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 FREM3P0C091 2139 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 MDC1Q14676 2089 aaKnown RBP10.58□□□□□ -0.72
RNF43-201ENST00000407977 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 ZNF415Q09FC8 603 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 RPL15P61313 204 aaKnown RBP10.58□□□□□ -0.72
RNF43-201ENST00000407977 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.58□□□□□ -0.72
RNF43-201ENST00000407977 CDKN1AP38936 164 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 SLAQ13239 276 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 TMEM75Q8N9X5 138 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 RCHY1Q96PM5 261 aa10.58□□□□□ -0.72
RNF43-201ENST00000407977 LSM4Q9Y4Z0 139 aaKnown RBP10.58□□□□□ -0.72
RNF43-201ENST00000407977 C5orf64Q2M2E5 130 aa10.57□□□□□ -0.72
RNF43-201ENST00000407977 SHANK2-AS3Q9BTD1 123 aa10.57□□□□□ -0.72
RNF43-201ENST00000407977 SPRR3Q9UBC9 169 aa10.57□□□□□ -0.72
RNF43-201ENST00000407977 MYOFQ9NZM1 2061 aa10.57□□□□□ -0.72
RNF43-201ENST00000407977 SRRM4A7MD48 611 aaKnown RBP10.57□□□□□ -0.72
RNF43-201ENST00000407977 LILRA1O75019 489 aa10.57□□□□□ -0.72
RNF43-201ENST00000407977 MESP1Q9BRJ9 268 aa10.57□□□□□ -0.72
RNF43-201ENST00000407977 SIGLEC9Q9Y336 463 aa10.57□□□□□ -0.72
RNF43-201ENST00000407977 VWC2LB2RUY7 222 aa10.57□□□□□ -0.72
RNF43-201ENST00000407977 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 PRSS46E5RG02 174 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 LAMTOR3Q9UHA4 124 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 TMEM178BH3BS89 294 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 K7EP34 96 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 COL11A2P13942 1736 aaPredicted RBP10.56□□□□□ -0.72
RNF43-201ENST00000407977 CLPSP04118 112 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 COX8AP10176 69 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 CD24P25063 80 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 TAL2Q16559 108 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 LGALS9BQ3B8N2 356 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 C17orf82Q86X59 251 aaPredicted RBP10.56□□□□□ -0.72
RNF43-201ENST00000407977 TMEM141Q96I45 108 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 PINLYPA6NC86 204 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 K7EP13 123 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 C9orf153Q5TBE3 101 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 H3BMM0 161 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 M0R1W7 72 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 STPG4Q8N801 248 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 UBE2WQ96B02 151 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 USMG5Q96IX5 58 aa10.56□□□□□ -0.72
RNF43-201ENST00000407977 RSPO3Q9BXY4 272 aaPredicted RBP10.56□□□□□ -0.72
RNF43-201ENST00000407977 E9PLN8 166 aa10.55□□□□□ -0.72
RNF43-201ENST00000407977 C14orf178Q8N769 122 aaPredicted RBP10.55□□□□□ -0.72
RNF43-201ENST00000407977 TRAV40A0A0B4J280 105 aa10.55□□□□□ -0.72
RNF43-201ENST00000407977 ARMS2P0C7Q2 107 aa10.55□□□□□ -0.72
RNF43-201ENST00000407977 ZCCHC24Q8N2G6 241 aaKnown RBP10.55□□□□□ -0.72
RNF43-201ENST00000407977 FXYD7P58549 80 aa10.55□□□□□ -0.72
RNF43-201ENST00000407977 Q8N8P6 123 aa10.55□□□□□ -0.72
RNF43-201ENST00000407977 Q8TAT8 98 aa10.55□□□□□ -0.72
RNF43-201ENST00000407977 POLR2AP24928 1970 aaKnown RBP10.54□□□□□ -0.72
RNF43-201ENST00000407977 NTN3O00634 580 aaPredicted RBP10.54□□□□□ -0.72
RNF43-201ENST00000407977 FOXG1P55316 489 aaPredicted RBP10.54□□□□□ -0.72
RNF43-201ENST00000407977 Q6ZWC4 215 aa10.54□□□□□ -0.72
RNF43-201ENST00000407977 NPSP0C0P6 89 aa10.54□□□□□ -0.72
RNF43-201ENST00000407977 BOD1L2Q8IYS8 172 aa10.54□□□□□ -0.72
RNF43-201ENST00000407977 LOC285556D6RIA3 1793 aa10.54□□□□□ -0.72
RNF43-201ENST00000407977 SIVA1O15304 175 aa10.54□□□□□ -0.72
RNF43-201ENST00000407977 SELLP14151 372 aa10.54□□□□□ -0.72
RNF43-201ENST00000407977 ERCC8Q13216 396 aa10.54□□□□□ -0.72
RNF43-201ENST00000407977 OR11H6Q8NGC7 330 aa10.54□□□□□ -0.72
RNF43-201ENST00000407977 ZNF48Q96MX3 618 aaPredicted RBP10.54□□□□□ -0.72
RNF43-201ENST00000407977 FAM223BA6NKX1 122 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 ZNF474Q6S9Z5 364 aaPredicted RBP10.53□□□□□ -0.72
RNF43-201ENST00000407977 RNF144BQ7Z419 303 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 FAM223AQ8IWN6 122 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 WNK3Q9BYP7 1800 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 A0A087WX48 190 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 C5orf63A6NC05 138 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 NDUFB8O95169 186 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 ZNF672Q499Z4 452 aaPredicted RBP10.53□□□□□ -0.72
RNF43-201ENST00000407977 GAGE2AQ6NT46 116 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 TRPT1Q86TN4 253 aaKnown RBP10.53□□□□□ -0.72
RNF43-201ENST00000407977 PRIMA1Q86XR5 153 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 GAFA1Q96PS6 74 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 A0A0G2JMZ2 1700 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 BUB1B-PAK6H3BSN5 160 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 E9PQ18 207 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 HTN3P15516 51 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 FHL1Q13642 323 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 UTF1Q5T230 341 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 VMO1Q7Z5L0 202 aa10.53□□□□□ -0.72
RNF43-201ENST00000407977 TSSC4Q9Y5U2 329 aaPredicted RBP10.53□□□□□ -0.72
RNF43-201ENST00000407977 TNS1Q9HBL0 1735 aaKnown RBP10.53□□□□□ -0.72
RNF43-201ENST00000407977 SMIM27A0A1W2PRY6 76 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms