RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 ORAOV1Q8WV07 137 aa12.73□□□□□ -0.37
CCDC85A-201ENST00000407595 CCL25O15444 150 aa12.73□□□□□ -0.37
CCDC85A-201ENST00000407595 PSG1P11464 419 aa12.73□□□□□ -0.37
CCDC85A-201ENST00000407595 FNDC4Q9H6D8 234 aaPredicted RBP12.73□□□□□ -0.37
CCDC85A-201ENST00000407595 NCKAP5O14513 1909 aa12.73□□□□□ -0.37
CCDC85A-201ENST00000407595 CGB1A6NKQ9 187 aa12.73□□□□□ -0.37
CCDC85A-201ENST00000407595 ASCL2Q99929 193 aa12.73□□□□□ -0.37
CCDC85A-201ENST00000407595 EPDR1Q9UM22 224 aa12.73□□□□□ -0.37
CCDC85A-201ENST00000407595 LY96Q9Y6Y9 160 aa12.73□□□□□ -0.37
CCDC85A-201ENST00000407595 TRAV8-1A0A0A6YYK1 113 aa12.72□□□□□ -0.37
CCDC85A-201ENST00000407595 RNASE8Q8TDE3 154 aaKnown RBP12.72□□□□□ -0.37
CCDC85A-201ENST00000407595 TMEM133Q9H2Q1 129 aa12.72□□□□□ -0.37
CCDC85A-201ENST00000407595 ZNF207O43670 478 aaKnown RBP12.72□□□□□ -0.37
CCDC85A-201ENST00000407595 OR2J3O76001 311 aa12.72□□□□□ -0.37
CCDC85A-201ENST00000407595 TIMM23O14925 209 aa12.72□□□□□ -0.37
CCDC85A-201ENST00000407595 MRPL52Q86TS9 123 aaKnown RBP12.72□□□□□ -0.37
CCDC85A-201ENST00000407595 DPM3Q9P2X0 92 aa12.72□□□□□ -0.37
CCDC85A-201ENST00000407595 NBEAQ8NFP9 2946 aa12.71□□□□□ -0.37
CCDC85A-201ENST00000407595 IGHV3-66A0A0C4DH42 116 aa12.71□□□□□ -0.37
CCDC85A-201ENST00000407595 LGALS7P47929 136 aa12.71□□□□□ -0.37
CCDC85A-201ENST00000407595 RIPPLY3P57055 190 aa12.71□□□□□ -0.37
CCDC85A-201ENST00000407595 FOXA2Q9Y261 457 aaPredicted RBP12.71□□□□□ -0.37
CCDC85A-201ENST00000407595 FN1P02751 2386 aaKnown RBP12.71□□□□□ -0.37
CCDC85A-201ENST00000407595 GCSHP23434 173 aa12.71□□□□□ -0.37
CCDC85A-201ENST00000407595 C18orf15Q96N68 181 aa12.71□□□□□ -0.37
CCDC85A-201ENST00000407595 PEF1Q9UBV8 284 aaKnown RBP12.71□□□□□ -0.37
CCDC85A-201ENST00000407595 FAM90A9PA6NNJ1 464 aa12.71□□□□□ -0.38
CCDC85A-201ENST00000407595 S100A7AQ86SG5 101 aa12.71□□□□□ -0.38
CCDC85A-201ENST00000407595 Q8NA96 180 aa12.71□□□□□ -0.38
CCDC85A-201ENST00000407595 OR10AG1Q8NH19 301 aa12.71□□□□□ -0.38
CCDC85A-201ENST00000407595 OR2T8A6NH00 312 aa12.71□□□□□ -0.38
CCDC85A-201ENST00000407595 ORM1P02763 201 aa12.71□□□□□ -0.38
CCDC85A-201ENST00000407595 FXYD7P58549 80 aa12.71□□□□□ -0.38
CCDC85A-201ENST00000407595 BRWD1-AS2P59051 145 aa12.71□□□□□ -0.38
CCDC85A-201ENST00000407595 VWC2Q2TAL6 325 aa12.71□□□□□ -0.38
CCDC85A-201ENST00000407595 CEACAM4O75871 244 aa12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 FCGR2BP31994 310 aaPredicted RBP12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 MAPK1IP1LQ8NDC0 245 aa12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 OSR1Q8TAX0 266 aaPredicted RBP12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 CACNG8Q8WXS5 425 aa12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 THYN1Q9P016 225 aa12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 CPAMD8Q8IZJ3 1885 aa12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 H3BUT2 72 aa12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 GPR183P32249 361 aa12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 MEF2CQ06413 473 aaPredicted RBP12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 RBPMS2Q6ZRY4 209 aaKnown RBP12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 Q9H3A6 140 aa12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 TP53TG3Q9ULZ0 132 aa12.7□□□□□ -0.38
CCDC85A-201ENST00000407595 UTF1Q5T230 341 aa12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 TNRC18O15417 2968 aaPredicted RBP12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 PLP1P60201 277 aa12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 FLNBO75369 2602 aaKnown RBP12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 C7orf71A4D174 169 aa12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 THBDP07204 575 aa12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 IGHV1-8P0DP01 117 aa12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 CKS2P33552 79 aa12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 CIARTQ8N365 385 aaPredicted RBP12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 CCL19Q99731 98 aa12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 C1RLQ9NZP8 487 aa12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 MRPL27Q9P0M9 148 aaKnown RBP12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 MRPS16Q9Y3D3 137 aaKnown RBP12.69□□□□□ -0.38
CCDC85A-201ENST00000407595 A0A1B0GUT8 65 aa12.68□□□□□ -0.38
CCDC85A-201ENST00000407595 C15orf65H3BRN8 121 aa12.68□□□□□ -0.38
CCDC85A-201ENST00000407595 SYS1-DBNDD2H3BUS1 97 aa12.68□□□□□ -0.38
CCDC85A-201ENST00000407595 C11orf52Q96A22 123 aa12.68□□□□□ -0.38
CCDC85A-201ENST00000407595 CCDC144NLQ6NUI1 221 aa12.68□□□□□ -0.38
CCDC85A-201ENST00000407595 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.68□□□□□ -0.38
CCDC85A-201ENST00000407595 MEGF9Q9H1U4 602 aa12.68□□□□□ -0.38
CCDC85A-201ENST00000407595 IGHV2-26A0A0B4J1V2 119 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 PRB1P04280 392 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 PF4V1P10720 104 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 CNTFRP26992 372 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 TWIST1Q15672 202 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 BRD3OSQ6XYD6 125 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 TCRBV4S1A1TA0A5B7 111 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 C17orf58Q2M2W7 97 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 EBLN2Q6P2I7 272 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 TMEM219Q86XT9 240 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 ST20Q9HBF5 79 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 IL4P05112 153 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 RNASE2P10153 161 aaKnown RBP12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 EXOC3-AS1Q8N2X6 119 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 NDFIP1Q9BT67 221 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 RNF114Q9Y508 228 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 KMT2EQ8IZD2 1858 aa12.67□□□□□ -0.38
CCDC85A-201ENST00000407595 IGLV3-9A0A075B6K5 115 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 C2orf83Q53S99 150 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 Q8TCH9 128 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 TMEM14BQ9NUH8 114 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 LSM4Q9Y4Z0 139 aaKnown RBP12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 TMEM189A5PLL7 270 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 COX6B1P14854 86 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 PRR20EP86478 221 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 PRR20CP86479 221 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 PRR20DP86480 221 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 PRR20BP86481 221 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 PRR20AP86496 221 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 PPP1R27Q86WC6 154 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 NUP37Q8NFH4 326 aa12.66□□□□□ -0.38
CCDC85A-201ENST00000407595 DOPEY1Q5JWR5 2465 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms