RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 MXD1Q05195 221 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 SMUG1Q53HV7 270 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 SPINK9Q5DT21 86 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 TMEM69Q5SWH9 247 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 FAM222AQ5U5X8 452 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 GSG1LQ6UXU4 331 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 IZUMO2Q6UXV1 221 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 ZNF705AQ6ZN79 300 aaPredicted RBP4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 TMEM182Q6ZP80 229 aaPredicted RBP4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 C6orf223Q8N319 242 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 C15orf53Q8NAA6 179 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 OR1S2Q8NGQ3 325 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 RNASE11Q8TAA1 199 aaKnown RBP4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 SLC25A38Q96DW6 304 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 SEC22AQ96IW7 307 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 CNBD2Q96M20 576 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 SCRT1Q9BWW7 348 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 SCRT2Q9NQ03 307 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 MBD2Q9UBB5 411 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 HLA-DRB4X5D2U9 266 aa4.77□□□□□ -1.65
CEACAM1-208ENST00000403461 VPS13DQ5THJ4 4388 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 DNAH11Q96DT5 4516 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 TRAV6A0A075B6T7 132 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 ZNF705FA8MVS1 300 aaPredicted RBP4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 ATP6V1G2O95670 118 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 ZNF705DP0CH99 300 aaPredicted RBP4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 ZNF705BP0CI00 300 aaPredicted RBP4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 SLC25A4P12235 298 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 PGAM2P15259 253 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 HRH1P35367 487 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 NKX2-1P43699 371 aaPredicted RBP4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 RPL5P46777 297 aaKnown RBP4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 ALDH3B2P48448 385 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 TAS2R20P59543 309 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 GABARAPL2P60520 117 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 DAD1P61803 113 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 OXA1LQ15070 435 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 VWC2Q2TAL6 325 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 TRIM16LQ309B1 348 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 TIGITQ495A1 244 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 EBLN2Q6P2I7 272 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 SIGLEC15Q6ZMC9 328 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 NFE4Q86UQ8 179 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 CROCCP3Q8IVE0 287 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 OR5H6Q8NGV6 325 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 COQ8AQ8NI60 647 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 TMEM208Q9BTX3 173 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 YTHDF1Q9BYJ9 559 aaKnown RBP4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 FXYD6Q9H0Q3 95 aa4.76□□□□□ -1.65
CEACAM1-208ENST00000403461 A0A0B4J293 547 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 LOC100506127A0A0U1RQW1 187 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 NBDYA0A0U1RRE5 68 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 HSBP1L1C9JCN9 74 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 IGKV3-20P01619 116 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 IGLV2-11P01706 119 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 IL4P05112 153 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 RNASE2P10153 161 aaKnown RBP4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 HLA-DMAP28067 261 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 OR10J1P30954 320 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 PRSS3P35030 304 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 RCVRNP35243 200 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 HTR2BP41595 481 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 CCL18P55774 89 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 YPEL3P61236 119 aaPredicted RBP4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 RRN3P1Q2M238 152 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 UBE2NLQ5JXB2 153 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 SAMD13Q5VXD3 122 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 SPATA31B1PQ5VZV4 182 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 FOXI2Q6ZQN5 318 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 SMIM29Q86T20 159 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 FAM219AQ8IW50 185 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 OR4B1Q8NGF8 309 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 LINC00052Q96N35 136 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 MAGT1Q9H0U3 335 aa4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 YTHDF2Q9Y5A9 579 aaKnown RBP4.75□□□□□ -1.65
CEACAM1-208ENST00000403461 DNAH2Q9P225 4427 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 FAT2Q9NYQ8 4349 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 SMIM31A0A1B0GVY4 71 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 K7EQM0 130 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 WRBO00258 174 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 IGKV1-39P01597 117 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 IGKV1-17P01599 117 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 IGKV1D-39P04432 117 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 IGLC1P0CG04 106 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 RD3LP0DJH9 198 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 ETV6P41212 452 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 PSMB3P49720 205 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 RND2P52198 227 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 FXYD7P58549 80 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 PSG9Q00887 426 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 DHODHQ02127 395 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 CLINT1Q14677 625 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 TTC32Q5I0X7 151 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 SPATA12Q7Z6I5 190 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 SAMD12Q8N8I0 201 aa4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 RNASEH2CQ8TDP1 164 aaKnown RBP4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 ZNF486Q96H40 463 aaPredicted RBP4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 SAV1Q9H4B6 383 aaPredicted RBP4.74□□□□□ -1.65
CEACAM1-208ENST00000403461 FNDC4Q9H6D8 234 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms