RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	MXD1	Q05195	221 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SMUG1	Q53HV7	270 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SPINK9	Q5DT21	86 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	TMEM69	Q5SWH9	247 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	FAM222A	Q5U5X8	452 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	GSG1L	Q6UXU4	331 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	IZUMO2	Q6UXV1	221 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	C6orf223	Q8N319	242 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	C15orf53	Q8NAA6	179 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	OR1S2	Q8NGQ3	325 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	RNASE11	Q8TAA1	199 aa	Known RBP	4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SLC25A38	Q96DW6	304 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SEC22A	Q96IW7	307 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	CNBD2	Q96M20	576 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SCRT1	Q9BWW7	348 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SCRT2	Q9NQ03	307 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	MBD2	Q9UBB5	411 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	HLA-DRB4	X5D2U9	266 aa		4.77	□□□□□ -1.65
CEACAM1-208	ENST00000403461	VPS13D	Q5THJ4	4388 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	DNAH11	Q96DT5	4516 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	TRAV6	A0A075B6T7	132 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	ATP6V1G2	O95670	118 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	ZNF705D	P0CH99	300 aa	Predicted RBP	4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	ZNF705B	P0CI00	300 aa	Predicted RBP	4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SLC25A4	P12235	298 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	PGAM2	P15259	253 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	HRH1	P35367	487 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	NKX2-1	P43699	371 aa	Predicted RBP	4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	RPL5	P46777	297 aa	Known RBP	4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	ALDH3B2	P48448	385 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	TAS2R20	P59543	309 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	GABARAPL2	P60520	117 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	DAD1	P61803	113 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	OXA1L	Q15070	435 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	VWC2	Q2TAL6	325 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	TRIM16L	Q309B1	348 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	TIGIT	Q495A1	244 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	EBLN2	Q6P2I7	272 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SIGLEC15	Q6ZMC9	328 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	NFE4	Q86UQ8	179 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	CROCCP3	Q8IVE0	287 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	OR5H6	Q8NGV6	325 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	COQ8A	Q8NI60	647 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	TMEM208	Q9BTX3	173 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461	FXYD6	Q9H0Q3	95 aa		4.76	□□□□□ -1.65
CEACAM1-208	ENST00000403461		A0A0B4J293	547 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	LOC100506127	A0A0U1RQW1	187 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	NBDY	A0A0U1RRE5	68 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	HSBP1L1	C9JCN9	74 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	IGKV3-20	P01619	116 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	IGLV2-11	P01706	119 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	IL4	P05112	153 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	RNASE2	P10153	161 aa	Known RBP	4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	HLA-DMA	P28067	261 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	OR10J1	P30954	320 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	PRSS3	P35030	304 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	RCVRN	P35243	200 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	HTR2B	P41595	481 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	CCL18	P55774	89 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	YPEL3	P61236	119 aa	Predicted RBP	4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	RRN3P1	Q2M238	152 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	UBE2NL	Q5JXB2	153 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SAMD13	Q5VXD3	122 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SPATA31B1P	Q5VZV4	182 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	FOXI2	Q6ZQN5	318 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SMIM29	Q86T20	159 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	FAM219A	Q8IW50	185 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	OR4B1	Q8NGF8	309 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	LINC00052	Q96N35	136 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	MAGT1	Q9H0U3	335 aa		4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.75	□□□□□ -1.65
CEACAM1-208	ENST00000403461	DNAH2	Q9P225	4427 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	FAT2	Q9NYQ8	4349 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	IGLV5-45	A0A087WSX0	123 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SMIM31	A0A1B0GVY4	71 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461		K7EQM0	130 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	WRB	O00258	174 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	IGKV1-39	P01597	117 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	IGKV1-17	P01599	117 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	IGKV1D-39	P04432	117 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	IGLC1	P0CG04	106 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	RD3L	P0DJH9	198 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	ETV6	P41212	452 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	PSMB3	P49720	205 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	RND2	P52198	227 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	FXYD7	P58549	80 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	PSG9	Q00887	426 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	DHODH	Q02127	395 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	CLINT1	Q14677	625 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	TTC32	Q5I0X7	151 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SPATA12	Q7Z6I5	190 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SAMD12	Q8N8I0	201 aa		4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	ZNF486	Q96H40	463 aa	Predicted RBP	4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	SAV1	Q9H4B6	383 aa	Predicted RBP	4.74	□□□□□ -1.65
CEACAM1-208	ENST00000403461	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms