RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 E9PQ18 207 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 CGB3P0DN86 165 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 MPZP25189 248 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 SRSF4Q08170 494 aaKnown RBP11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 C5orf64Q2M2E5 130 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 LY6G6FQ5SQ64 297 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 IGKCP01834 107 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 NIT1Q86X76 327 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 TMEM86BQ8N661 226 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 TCRAP04437 139 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 SLC25A48Q6ZT89 311 aaKnown RBP11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 ACACAQ13085 2346 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 RTTNQ86VV8 2226 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 H0YIZ8 118 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 INSP01308 110 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 FNDC4Q9H6D8 234 aaPredicted RBP11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 FAM90A9PA6NNJ1 464 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 F2Z2F3 143 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 GATD1Q8NB37 220 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 PRDM13Q9H4Q3 707 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 OOSP1A8MZH6 123 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 F5H768 121 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 HGFACQ04756 655 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 JPT2Q9H910 190 aa11.59□□□□□ -0.55
PCDHA11-201ENST00000398640 H0YJW9 148 aa11.58□□□□□ -0.55
PCDHA11-201ENST00000398640 J3QLI3 93 aa11.58□□□□□ -0.55
PCDHA11-201ENST00000398640 CDK2AP2O75956 126 aa11.58□□□□□ -0.56
PCDHA11-201ENST00000398640 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
PCDHA11-201ENST00000398640 TECTAO75443 2155 aa11.58□□□□□ -0.56
PCDHA11-201ENST00000398640 OVOL3O00110 214 aa11.58□□□□□ -0.56
PCDHA11-201ENST00000398640 A0A1B0GWJ7 208 aa11.58□□□□□ -0.56
PCDHA11-201ENST00000398640 ID3Q02535 119 aa11.58□□□□□ -0.56
PCDHA11-201ENST00000398640 GGTLC1Q9BX51 225 aa11.58□□□□□ -0.56
PCDHA11-201ENST00000398640 HOXA3O43365 443 aaPredicted RBP11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 LURAP1LQ8IV03 231 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 MGST2Q99735 147 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 C1QTNF4Q9BXJ3 329 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 PLNP26678 52 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 DEFB131AP59861 70 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 LAGE3Q14657 143 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 RHPN1-AS1Q9BWJ2 59 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 LSM4Q9Y4Z0 139 aaKnown RBP11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 LINC01619G3V211 115 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 RPL36AP83881 106 aaKnown RBP11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 OR2K2Q8NGT1 345 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 TSKUQ8WUA8 353 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 RPL36ALQ969Q0 106 aaKnown RBP11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 SPAG8Q99932 426 aaPredicted RBP11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 WDR83OSQ9Y284 106 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 D6R8Y8 96 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 SPSB3Q6PJ21 355 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 FAM223BA6NKX1 122 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 PAX4O43316 350 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 LYZL1Q6UWQ5 148 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 FAM223AQ8IWN6 122 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 USMG5Q96IX5 58 aa11.57□□□□□ -0.56
PCDHA11-201ENST00000398640 CLDN16Q9Y5I7 305 aa11.56□□□□□ -0.56
PCDHA11-201ENST00000398640 GPR179Q6PRD1 2367 aa11.56□□□□□ -0.56
PCDHA11-201ENST00000398640 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
PCDHA11-201ENST00000398640 TMEM170AQ8WVE7 144 aa11.56□□□□□ -0.56
PCDHA11-201ENST00000398640 SPOCK3Q9BQ16 436 aa11.56□□□□□ -0.56
PCDHA11-201ENST00000398640 ZNRD1Q9P1U0 126 aa11.56□□□□□ -0.56
PCDHA11-201ENST00000398640 XCL2Q9UBD3 114 aa11.56□□□□□ -0.56
PCDHA11-201ENST00000398640 A0A087WWL8 130 aa11.56□□□□□ -0.56
PCDHA11-201ENST00000398640 DAD1P61803 113 aa11.56□□□□□ -0.56
PCDHA11-201ENST00000398640 SH2D1AO60880 128 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 PPBPP02775 128 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 STAG3L3P0CL85 134 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 LCN12Q6JVE5 192 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 C1orf159Q96HA4 380 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 SLC25A2Q9BXI2 301 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 IGKV1D-17A0A075B6S4 117 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 GGTLC3B5MD39 225 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 GHRHP01286 108 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 ZNF138P52744 262 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 A0A1W2PNU3 283 aaPredicted RBP11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 LINC00473A8K010 186 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 CD5P06127 495 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 CGB7P0DN87 165 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 ERCC8Q13216 396 aa11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 INTS1Q8N201 2190 aaKnown RBP11.55□□□□□ -0.56
PCDHA11-201ENST00000398640 M0R2P5 195 aa11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 C14orf178Q8N769 122 aaPredicted RBP11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 DERL1Q9BUN8 251 aa11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 IGHV1-69DA0A0B4J2H0 117 aa11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 IGHV1-69P01742 117 aa11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 GSN-AS1Q9NRJ2 163 aa11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 SIGLEC9Q9Y336 463 aa11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 ZMAT4Q9H898 229 aa11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 TRAV13-1A0A0B4J241 112 aa11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 PNRC2Q9NPJ4 139 aaKnown RBP11.54□□□□□ -0.56
PCDHA11-201ENST00000398640 MORN3Q6PF18 240 aaPredicted RBP11.53□□□□□ -0.56
PCDHA11-201ENST00000398640 SDK2Q58EX2 2172 aa11.53□□□□□ -0.56
PCDHA11-201ENST00000398640 C5orf30Q96GV9 206 aa11.53□□□□□ -0.56
PCDHA11-201ENST00000398640 GRNP28799 593 aaKnown RBP11.53□□□□□ -0.56
PCDHA11-201ENST00000398640 INS-IGF2F8WCM5 200 aa11.53□□□□□ -0.56
PCDHA11-201ENST00000398640 MLANAQ16655 118 aa11.53□□□□□ -0.56
PCDHA11-201ENST00000398640 TEX43Q6ZNM6 134 aa11.53□□□□□ -0.56
PCDHA11-201ENST00000398640 GNB1LQ9BYB4 327 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms