RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TIMM23O14925 209 aa14.59□□□□□ -0.07
CHRFAM7A-202ENST00000397827 SLC25A5P05141 298 aaKnown RBP14.59□□□□□ -0.07
CHRFAM7A-202ENST00000397827 C3orf79P0CE67 100 aa14.59□□□□□ -0.07
CHRFAM7A-202ENST00000397827 MYCNOSP40205 109 aa14.59□□□□□ -0.07
CHRFAM7A-202ENST00000397827 Q0VG73 95 aa14.59□□□□□ -0.07
CHRFAM7A-202ENST00000397827 GNB4Q9HAV0 340 aa14.59□□□□□ -0.07
CHRFAM7A-202ENST00000397827 TRBV9A0A0B4J1U6 114 aa14.58□□□□□ -0.07
CHRFAM7A-202ENST00000397827 LY6LH3BQJ8 138 aa14.58□□□□□ -0.07
CHRFAM7A-202ENST00000397827 LIPFP07098 398 aa14.58□□□□□ -0.07
CHRFAM7A-202ENST00000397827 OR4F17Q8NGA8 305 aa14.58□□□□□ -0.07
CHRFAM7A-202ENST00000397827 MRPL27Q9P0M9 148 aaKnown RBP14.58□□□□□ -0.07
CHRFAM7A-202ENST00000397827 A0A1W2PRD5 423 aa14.58□□□□□ -0.08
CHRFAM7A-202ENST00000397827 A0A1W2PRF3 423 aa14.58□□□□□ -0.08
CHRFAM7A-202ENST00000397827 A0A1W2PRM7 423 aa14.58□□□□□ -0.08
CHRFAM7A-202ENST00000397827 CORTO00230 105 aa14.58□□□□□ -0.08
CHRFAM7A-202ENST00000397827 GOSR1O95249 250 aa14.58□□□□□ -0.08
CHRFAM7A-202ENST00000397827 C8orf46Q8TAG6 207 aa14.58□□□□□ -0.08
CHRFAM7A-202ENST00000397827 EPDR1Q9UM22 224 aa14.58□□□□□ -0.08
CHRFAM7A-202ENST00000397827 CHD8Q9HCK8 2581 aa14.58□□□□□ -0.08
CHRFAM7A-202ENST00000397827 WNK2Q9Y3S1 2297 aa14.58□□□□□ -0.08
CHRFAM7A-202ENST00000397827 TAX1BP3O14907 124 aa14.57□□□□□ -0.08
CHRFAM7A-202ENST00000397827 CNIH1O95406 144 aa14.57□□□□□ -0.08
CHRFAM7A-202ENST00000397827 KLRD1Q13241 179 aa14.57□□□□□ -0.08
CHRFAM7A-202ENST00000397827 LCN12Q6JVE5 192 aa14.57□□□□□ -0.08
CHRFAM7A-202ENST00000397827 NCOR2Q9Y618 2525 aa14.57□□□□□ -0.08
CHRFAM7A-202ENST00000397827 RBP4P02753 201 aa14.57□□□□□ -0.08
CHRFAM7A-202ENST00000397827 LYZP61626 148 aa14.57□□□□□ -0.08
CHRFAM7A-202ENST00000397827 UBE2G1P62253 170 aa14.57□□□□□ -0.08
CHRFAM7A-202ENST00000397827 STXBP6Q8NFX7 210 aa14.57□□□□□ -0.08
CHRFAM7A-202ENST00000397827 TOX4O94842 621 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 WDR73Q6P4I2 378 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 COL25A1Q9BXS0 654 aaPredicted RBP14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 IGLC1P0CG04 106 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 GP9P14770 177 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 NHLH1Q02575 133 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 KLRB1Q12918 225 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 LY6G5BQ8NDX9 201 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 RAB1BQ9H0U4 201 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 MT-ND6P03923 174 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 AMY1AP04745 511 aa14.56□□□□□ -0.08
CHRFAM7A-202ENST00000397827 A0A1W2PS18 150 aa14.55□□□□□ -0.08
CHRFAM7A-202ENST00000397827 IZUMO1RA6ND01 250 aa14.55□□□□□ -0.08
CHRFAM7A-202ENST00000397827 I3L2K1 104 aa14.55□□□□□ -0.08
CHRFAM7A-202ENST00000397827 HTR1DP28221 377 aa14.55□□□□□ -0.08
CHRFAM7A-202ENST00000397827 MPV17L2Q567V2 206 aa14.55□□□□□ -0.08
CHRFAM7A-202ENST00000397827 FAM19A2Q8N3H0 131 aa14.55□□□□□ -0.08
CHRFAM7A-202ENST00000397827 RCHY1Q96PM5 261 aa14.55□□□□□ -0.08
CHRFAM7A-202ENST00000397827 BMPR1BO00238 502 aa14.54□□□□□ -0.08
CHRFAM7A-202ENST00000397827 SRIP30626 198 aa14.54□□□□□ -0.08
CHRFAM7A-202ENST00000397827 MBD6Q96DN6 1003 aa14.54□□□□□ -0.08
CHRFAM7A-202ENST00000397827 TP73-AS1Q9UF72 201 aa14.54□□□□□ -0.08
CHRFAM7A-202ENST00000397827 NUP35Q8NFH5 326 aa14.54□□□□□ -0.08
CHRFAM7A-202ENST00000397827 WFDC12Q8WWY7 111 aa14.54□□□□□ -0.08
CHRFAM7A-202ENST00000397827 DPM3Q9P2X0 92 aa14.54□□□□□ -0.08
CHRFAM7A-202ENST00000397827 HIGD1AQ9Y241 93 aa14.54□□□□□ -0.08
CHRFAM7A-202ENST00000397827 SLAQ13239 276 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 FAM231DQ6ZW35 169 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 TIMD4Q96H15 378 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 KCNS1Q96KK3 526 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 RASL11BQ9BPW5 248 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 Q9H3A6 140 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 C7orf69Q9H7B7 122 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 ZNF331Q9NQX6 463 aaPredicted RBP14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 NTF3P20783 257 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 KLF17Q5JT82 389 aaPredicted RBP14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 PRR31Q5SQ13 230 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 S4R3C0 116 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 AKAP6Q13023 2319 aa14.53□□□□□ -0.08
CHRFAM7A-202ENST00000397827 HLA-DQA1P01909 254 aa14.52□□□□□ -0.08
CHRFAM7A-202ENST00000397827 PRB4P10163 310 aaPredicted RBP14.52□□□□□ -0.08
CHRFAM7A-202ENST00000397827 PLP1P60201 277 aa14.52□□□□□ -0.08
CHRFAM7A-202ENST00000397827 LINC00322Q6ZN03 302 aaPredicted RBP14.52□□□□□ -0.08
CHRFAM7A-202ENST00000397827 BORCS7Q96B45 105 aa14.52□□□□□ -0.08
CHRFAM7A-202ENST00000397827 IGKV1-17P01599 117 aa14.52□□□□□ -0.09
CHRFAM7A-202ENST00000397827 HES1Q14469 280 aa14.52□□□□□ -0.09
CHRFAM7A-202ENST00000397827 GRAMD2BQ96HH9 432 aa14.52□□□□□ -0.09
CHRFAM7A-202ENST00000397827 RNF5Q99942 180 aa14.52□□□□□ -0.09
CHRFAM7A-202ENST00000397827 SLC25A39Q9BZJ4 359 aaPredicted RBP14.52□□□□□ -0.09
CHRFAM7A-202ENST00000397827 HIVEP3Q5T1R4 2406 aa14.52□□□□□ -0.09
CHRFAM7A-202ENST00000397827 ZNF324O75467 553 aaPredicted RBP14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 APCSP02743 223 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 IGLL1P15814 213 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 UCNP55089 124 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 PAX2Q02962 417 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 CFHR4Q92496 578 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 GPR82Q96P67 336 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 KLF12Q9Y4X4 402 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 HIGD1CA8MV81 97 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 K7EIM0 57 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 NBR2O15453 112 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 PSG9Q00887 426 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 GDF5OSQ5U4N7 250 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 C5orf17Q8NAS9 161 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 OR11H6Q8NGC7 330 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 ZC2HC1AQ96GY0 325 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 TRAV9-2A0A087WT02 112 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 TRAV8-1A0A0A6YYK1 113 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 VWC2LB2RUY7 222 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 TCRAP04437 139 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 COX19Q49B96 90 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms