RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 OVOL1O14753 267 aa17.97■□□□□ 0.47
TSPAN4-202ENST00000397396 OR7C2O60412 319 aa17.97■□□□□ 0.47
TSPAN4-202ENST00000397396 NMBP08949 121 aa17.97■□□□□ 0.47
TSPAN4-202ENST00000397396 TM4SF20Q53R12 229 aa17.97■□□□□ 0.47
TSPAN4-202ENST00000397396 OR8I2Q8N0Y5 310 aa17.97■□□□□ 0.47
TSPAN4-202ENST00000397396 SLC25A2Q9BXI2 301 aa17.97■□□□□ 0.47
TSPAN4-202ENST00000397396 SMPXQ9UHP9 88 aa17.97■□□□□ 0.47
TSPAN4-202ENST00000397396 C2orf70A6NJV1 201 aa17.96■□□□□ 0.46
TSPAN4-202ENST00000397396 CD5P06127 495 aa17.96■□□□□ 0.46
TSPAN4-202ENST00000397396 PPT1P50897 306 aa17.96■□□□□ 0.46
TSPAN4-202ENST00000397396 OR51M1Q9H341 326 aa17.96■□□□□ 0.46
TSPAN4-202ENST00000397396 ARL14EPLP0DKL9 152 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 GALR1P47211 349 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 MORN5Q5VZ52 161 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 IL34Q6ZMJ4 242 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 SSX7Q7RTT5 188 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 LYPD6BQ8NI32 183 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 FAM167A-AS1Q96KT0 104 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 PAXXQ9BUH6 204 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 RHPN1-AS1Q9BWJ2 59 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 TMEM167BQ9NRX6 74 aa17.95■□□□□ 0.46
TSPAN4-202ENST00000397396 HELTA6NFD8 242 aa17.94■□□□□ 0.46
TSPAN4-202ENST00000397396 HMGB3O15347 200 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-202ENST00000397396 PSMB3P49720 205 aa17.94■□□□□ 0.46
TSPAN4-202ENST00000397396 MEOX2P50222 304 aa17.94■□□□□ 0.46
TSPAN4-202ENST00000397396 LEMD1Q68G75 181 aa17.94■□□□□ 0.46
TSPAN4-202ENST00000397396 C16orf54Q6UWD8 224 aa17.94■□□□□ 0.46
TSPAN4-202ENST00000397396 TRAV5A0A0B4J249 113 aa17.93■□□□□ 0.46
TSPAN4-202ENST00000397396 CHEK1O14757 476 aa17.93■□□□□ 0.46
TSPAN4-202ENST00000397396 CBLN1P23435 193 aa17.93■□□□□ 0.46
TSPAN4-202ENST00000397396 UBE2L3P68036 154 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-202ENST00000397396 HRH4Q9H3N8 390 aa17.93■□□□□ 0.46
TSPAN4-202ENST00000397396 SIGLEC8Q9NYZ4 499 aa17.93■□□□□ 0.46
TSPAN4-202ENST00000397396 IFNA1P01562 189 aa17.92■□□□□ 0.46
TSPAN4-202ENST00000397396 FOLR2P14207 255 aa17.92■□□□□ 0.46
TSPAN4-202ENST00000397396 GP9P14770 177 aa17.92■□□□□ 0.46
TSPAN4-202ENST00000397396 GCHFRP30047 84 aa17.92■□□□□ 0.46
TSPAN4-202ENST00000397396 IQCF2Q8IXL9 164 aa17.92■□□□□ 0.46
TSPAN4-202ENST00000397396 GLMPQ8WWB7 406 aa17.92■□□□□ 0.46
TSPAN4-202ENST00000397396 APOHP02749 345 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-202ENST00000397396 HIST1H1EP10412 219 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-202ENST00000397396 ATF4P18848 351 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-202ENST00000397396 FGF8P55075 233 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-202ENST00000397396 GUK1Q16774 197 aa17.91■□□□□ 0.46
TSPAN4-202ENST00000397396 SIGLEC15Q6ZMC9 328 aa17.91■□□□□ 0.46
TSPAN4-202ENST00000397396 LINC00482Q8N8I6 264 aa17.91■□□□□ 0.46
TSPAN4-202ENST00000397396 IGHV3-49A0A0A0MS15 119 aa17.9■□□□□ 0.46
TSPAN4-202ENST00000397396 TAGLN2P37802 199 aaKnown RBP17.9■□□□□ 0.46
TSPAN4-202ENST00000397396 PMS2P11Q13670 270 aa17.9■□□□□ 0.46
TSPAN4-202ENST00000397396 DYNLRB2Q8TF09 96 aa17.9■□□□□ 0.46
TSPAN4-202ENST00000397396 ARL2-SNX15V9GYD0 113 aa17.9■□□□□ 0.46
TSPAN4-202ENST00000397396 IGHV3OR16-13A0A075B7E8 117 aa17.89■□□□□ 0.45
TSPAN4-202ENST00000397396 IGHV3-74A0A0B4J1X5 117 aa17.89■□□□□ 0.45
TSPAN4-202ENST00000397396 IGHV3-66A0A0C4DH42 116 aa17.89■□□□□ 0.45
TSPAN4-202ENST00000397396 CSN3P07498 182 aa17.89■□□□□ 0.45
TSPAN4-202ENST00000397396 SAMD13Q5VXD3 122 aa17.89■□□□□ 0.45
TSPAN4-202ENST00000397396 ZNF503Q96F45 646 aa17.89■□□□□ 0.45
TSPAN4-202ENST00000397396 MANBALQ9NQG1 85 aa17.89■□□□□ 0.45
TSPAN4-202ENST00000397396 A0A087X0K7 114 aa17.88■□□□□ 0.45
TSPAN4-202ENST00000397396 A0A1B0GV50 99 aa17.88■□□□□ 0.45
TSPAN4-202ENST00000397396 MRPS12O15235 138 aaKnown RBP17.88■□□□□ 0.45
TSPAN4-202ENST00000397396 EIF3GO75821 320 aaKnown RBP eCLIP17.88■□□□□ 0.45
TSPAN4-202ENST00000397396 PYYP10082 97 aa17.88■□□□□ 0.45
TSPAN4-202ENST00000397396 PDE6HQ13956 83 aa17.88■□□□□ 0.45
TSPAN4-202ENST00000397396 SUN5Q8TC36 379 aa17.88■□□□□ 0.45
TSPAN4-202ENST00000397396 PCNPQ8WW12 178 aaKnown RBP17.88■□□□□ 0.45
TSPAN4-202ENST00000397396 OR10J4P0C629 311 aa17.87■□□□□ 0.45
TSPAN4-202ENST00000397396 NBEAP1P0C6P0 100 aa17.87■□□□□ 0.45
TSPAN4-202ENST00000397396 IGLC2P0DOY2 106 aa17.87■□□□□ 0.45
TSPAN4-202ENST00000397396 FXYD5Q96DB9 178 aa17.87■□□□□ 0.45
TSPAN4-202ENST00000397396 ZNF785A8K8V0 405 aa17.86■□□□□ 0.45
TSPAN4-202ENST00000397396 ZNF253O75346 499 aa17.86■□□□□ 0.45
TSPAN4-202ENST00000397396 TCF24Q7RTU0 167 aa17.86■□□□□ 0.45
TSPAN4-202ENST00000397396 MCRIP2Q9BUT9 160 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-202ENST00000397396 MED9Q9NWA0 146 aa17.85■□□□□ 0.45
TSPAN4-202ENST00000397396 GNG13Q9P2W3 67 aa17.85■□□□□ 0.45
TSPAN4-202ENST00000397396 INSL3P51460 131 aa17.84■□□□□ 0.45
TSPAN4-202ENST00000397396 RPL11P62913 178 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-202ENST00000397396 LYPD1Q8N2G4 141 aa17.84■□□□□ 0.45
TSPAN4-202ENST00000397396 OR2K2Q8NGT1 345 aa17.84■□□□□ 0.45
TSPAN4-202ENST00000397396 TXNDC17Q9BRA2 123 aa17.84■□□□□ 0.45
TSPAN4-202ENST00000397396 NKX6-2Q9C056 277 aaPredicted RBP17.84■□□□□ 0.45
TSPAN4-202ENST00000397396 TMPRSS5Q9H3S3 457 aa17.84■□□□□ 0.45
TSPAN4-202ENST00000397396 MLXQ9UH92 298 aa17.84■□□□□ 0.45
TSPAN4-202ENST00000397396 TRBV19A0A075B6N1 114 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 TRAV25A0A0B4J276 109 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 A0A1W2PRE2 83 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 SAP30O75446 220 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 EDN2P20800 178 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 PAFAH1B2P68402 229 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 CCL20P78556 96 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 PSG9Q00887 426 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 ADAMTSL5Q6ZMM2 481 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 SLC50A1Q9BRV3 221 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 NRN1Q9NPD7 142 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 ZNF586Q9NXT0 402 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 CLEC5AQ9NY25 188 aa17.83■□□□□ 0.44
TSPAN4-202ENST00000397396 FAM90A2PQ658T7 463 aa17.82■□□□□ 0.44
TSPAN4-202ENST00000397396 RBPMS2Q6ZRY4 209 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-202ENST00000397396 BLNKQ8WV28 456 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms