RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 FAM222BQ8WU58 562 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 FMC1Q96HJ9 113 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 IGHV3-21A0A0B4J1V1 117 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 APOBEC3AP31941 199 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-206ENST00000397163 FCGR2BP31994 310 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-206ENST00000397163 HCP5Q6MZN7 132 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 CCDC144NLQ6NUI1 221 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 THAP8Q8NA92 274 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 OR10X1Q8NGY0 326 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 VSTM2AQ8TAG5 236 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 H1FXQ92522 213 aaKnown RBP7.35□□□□□ -1.23
CAPN3-206ENST00000397163 NDFIP1Q9BT67 221 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 MS4A6AQ9H2W1 248 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 Q9H3A6 140 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 ZNF492Q9P255 531 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 INTS1Q8N201 2190 aaKnown RBP7.35□□□□□ -1.23
CAPN3-206ENST00000397163 TRAV8-1A0A0A6YYK1 113 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 A0A1W2PPM0 123 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 TCRAP04437 139 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 CD59P13987 128 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 CCL3L1P16619 93 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 TMEM30BQ3MIR4 351 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 OR4C13Q8NGP0 309 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 TMEM167AQ8TBQ9 72 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 A6NDN8 102 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 CGB1A6NKQ9 187 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 LTAP01374 205 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 FAM87AP0C7U9 286 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 NMUP48645 174 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 SEC11AP67812 179 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 ATP5G2Q06055 141 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 ZCCHC24Q8N2G6 241 aaKnown RBP7.34□□□□□ -1.23
CAPN3-206ENST00000397163 CIARTQ8N365 385 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-206ENST00000397163 OR5AN1Q8NGI8 311 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 ASCL2Q99929 193 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 PIEZO1Q92508 2521 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 NAV3Q8IVL0 2385 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 GAGE12HA6NDE8 117 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 INS-IGF2F8WCM5 200 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 H3BRM9 83 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 SLC25A17O43808 307 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 APELAP0DMC3 54 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 ADAMTSL5Q6ZMM2 481 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 SH2D6Q7Z4S9 175 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 PRNTQ86SH4 94 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 WFDC3Q8IUB2 231 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 GFRA4Q9GZZ7 299 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 LINC00574Q9H8X3 128 aa7.34□□□□□ -1.23
CAPN3-206ENST00000397163 IGHV1-46P01743 117 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 FAM106CPP0CH98 169 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 GATA4P43694 442 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 DIAPH2-AS1Q14236 149 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 PSG3Q16557 428 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 FAM106AQ4KMX7 169 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 Q71RC1 249 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-206ENST00000397163 FAM169BQ8N8A8 192 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 FDCSPQ8NFU4 85 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 TTTY13Q9BZ97 58 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 AP5S1Q9NUS5 200 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 LINC00312Q9Y6C7 94 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 CEP250Q9BV73 2442 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 COL27A1Q8IZC6 1860 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-206ENST00000397163 A0A1W2PPI3 338 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 K7EQM0 130 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 APOHP02749 345 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-206ENST00000397163 RUSC1-AS1Q66K80 236 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 PCP2Q8IVA1 136 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 C18orf15Q96N68 181 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 SMG1Q96Q15 3661 aaKnown RBP7.33□□□□□ -1.24
CAPN3-206ENST00000397163 LOC389332A0A1B0GUA5 103 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 ENSAO43768 121 aaKnown RBP7.33□□□□□ -1.24
CAPN3-206ENST00000397163 FABP2P12104 132 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 TIMM23BQ5SRD1 257 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 FA2HQ7L5A8 372 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 ARPC1AQ92747 370 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 TPSG1Q9NRR2 321 aa7.33□□□□□ -1.24
CAPN3-206ENST00000397163 NKX2-8O15522 239 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 GCSHP23434 173 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 INSL3P51460 131 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 WFDC2Q14508 124 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 VMA21Q3ZAQ7 101 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 LINC01545Q5VT33 79 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 GOLT1AQ6ZVE7 132 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 Q86TA4 180 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 PRSS3P2Q8NHM4 247 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 TPPP3Q9BW30 176 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 DKK4Q9UBT3 224 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 ABCA1O95477 2261 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 ZNF292O60281 2723 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 IGLV3-9A0A075B6K5 115 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 HAX1O00165 279 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 FGF6P10767 208 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 CSN1S1P47710 185 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 SAMD5Q5TGI4 173 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 SRSF12Q8WXF0 261 aaKnown RBP7.32□□□□□ -1.24
CAPN3-206ENST00000397163 SMPXQ9UHP9 88 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 CACNA1GO43497 2377 aa7.32□□□□□ -1.24
CAPN3-206ENST00000397163 A0A1B0GUT8 65 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 GP9P14770 177 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms