RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 OR4B1Q8NGF8 309 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 BTF3L4Q96K17 158 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 NEU1Q99519 415 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 TXNDC17Q9BRA2 123 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 HIST1H1EP10412 219 aaKnown RBP12.07□□□□□ -0.48
MCF2L-205ENST00000397017 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 HSPB9Q9BQS6 159 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 UFC1Q9Y3C8 167 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 FOXA3P55318 350 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-205ENST00000397017 LURAP1LQ8IV03 231 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 C11orf42Q8N5U0 333 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 C8orf46Q8TAG6 207 aa12.07□□□□□ -0.48
MCF2L-205ENST00000397017 TCF24Q7RTU0 167 aa12.06□□□□□ -0.48
MCF2L-205ENST00000397017 C5orf17Q8NAS9 161 aa12.06□□□□□ -0.48
MCF2L-205ENST00000397017 TCAPO15273 167 aa12.06□□□□□ -0.48
MCF2L-205ENST00000397017 OR11H6Q8NGC7 330 aa12.06□□□□□ -0.48
MCF2L-205ENST00000397017 LINC01548A6NM66 108 aa12.06□□□□□ -0.48
MCF2L-205ENST00000397017 LDLRAD2Q5SZI1 272 aa12.06□□□□□ -0.48
MCF2L-205ENST00000397017 Q8TAT8 98 aa12.06□□□□□ -0.48
MCF2L-205ENST00000397017 EPDR1Q9UM22 224 aa12.06□□□□□ -0.48
MCF2L-205ENST00000397017 CHD6Q8TD26 2715 aa12.06□□□□□ -0.48
MCF2L-205ENST00000397017 RAB4AP20338 218 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 C11orf71Q6IPW1 123 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 GGTLC3B5MD39 225 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 IGHV4-59P01825 116 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 CD33P20138 364 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 PPIFP30405 207 aaKnown RBP12.05□□□□□ -0.48
MCF2L-205ENST00000397017 CIARTQ8N365 385 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-205ENST00000397017 C10orf105Q8TEF2 133 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 C17orf77Q96MU5 243 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 RNF5Q99942 180 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 TBL2Q9Y4P3 447 aaKnown RBP12.05□□□□□ -0.48
MCF2L-205ENST00000397017 IGKV2-40A0A087WW87 121 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-205ENST00000397017 IGKV2D-40P01614 121 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-205ENST00000397017 AMTP48728 403 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 TRGV9Q99603 122 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 TCEAL7Q9BRU2 100 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 J3QKU1 62 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 SMIM15Q7Z3B0 74 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 SIGLECL1Q8N7X8 197 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 LINC01356Q8N9X3 169 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 SSBP4Q9BWG4 385 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-205ENST00000397017 RNF24Q9Y225 148 aa12.05□□□□□ -0.48
MCF2L-205ENST00000397017 LSM4Q9Y4Z0 139 aaKnown RBP12.05□□□□□ -0.48
MCF2L-205ENST00000397017 TEX38Q6PEX7 206 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 COL27A1Q8IZC6 1860 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-205ENST00000397017 A0A1W2PRE2 83 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 OOSP1A8MZH6 123 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 PRR20EP86478 221 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 PRR20CP86479 221 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 PRR20DP86480 221 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 PRR20BP86481 221 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 PRR20AP86496 221 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 TMEM18Q96B42 140 aa12.04□□□□□ -0.48
MCF2L-205ENST00000397017 MRPL18Q9H0U6 180 aaKnown RBP12.04□□□□□ -0.48
MCF2L-205ENST00000397017 HIST1H1AQ02539 215 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-205ENST00000397017 TMEM78Q5T7P6 136 aa12.03□□□□□ -0.48
MCF2L-205ENST00000397017 NACAE9PAV3 2078 aa12.03□□□□□ -0.48
MCF2L-205ENST00000397017 LOC389332A0A1B0GUA5 103 aa12.03□□□□□ -0.48
MCF2L-205ENST00000397017 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
MCF2L-205ENST00000397017 IGLC1P0CG04 106 aa12.03□□□□□ -0.48
MCF2L-205ENST00000397017 BCL6BQ8N143 479 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-205ENST00000397017 TGOLN2O43493 480 aa12.03□□□□□ -0.48
MCF2L-205ENST00000397017 DEFB112Q30KQ8 113 aa12.03□□□□□ -0.48
MCF2L-205ENST00000397017 A8MWL6 223 aa12.02□□□□□ -0.48
MCF2L-205ENST00000397017 NDUFS8O00217 210 aa12.02□□□□□ -0.48
MCF2L-205ENST00000397017 PAX8Q06710 450 aa12.02□□□□□ -0.48
MCF2L-205ENST00000397017 FAM106AQ4KMX7 169 aa12.02□□□□□ -0.48
MCF2L-205ENST00000397017 PVRIGQ6DKI7 326 aa12.02□□□□□ -0.48
MCF2L-205ENST00000397017 CBY1Q9Y3M2 126 aa12.02□□□□□ -0.48
MCF2L-205ENST00000397017 IGHV7-81A0A0B4J1V7 117 aa12.02□□□□□ -0.49
MCF2L-205ENST00000397017 KRTAP10-9P60411 292 aa12.02□□□□□ -0.49
MCF2L-205ENST00000397017 PACRGQ96M98 296 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-205ENST00000397017 LYPD6BQ8NI32 183 aa12.02□□□□□ -0.49
MCF2L-205ENST00000397017 PARD6GQ9BYG4 376 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-205ENST00000397017 LINC00574Q9H8X3 128 aa12.02□□□□□ -0.49
MCF2L-205ENST00000397017 SLC25A16P16260 332 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 GPR82Q96P67 336 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 NPIPB5A8MRT5 1133 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 HIGD1CA8MV81 97 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 GCGP01275 180 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 SRIP30626 198 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 HIST2H2BDQ6DRA6 164 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 RNF182Q8N6D2 247 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 SLC25A2Q9BXI2 301 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 TMEM189A5PLL7 270 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 APCSP02743 223 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 PATE2Q6UY27 113 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 DYNLRB2Q8TF09 96 aa12.01□□□□□ -0.49
MCF2L-205ENST00000397017 RAI1Q7Z5J4 1906 aaPredicted RBP12□□□□□ -0.49
MCF2L-205ENST00000397017 TSTD3H0UI37 97 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 SIRPDQ9H106 197 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 A0A1B0GW64 132 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 OVOL3O00110 214 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 TCTAP57738 103 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 DSCR9P59020 149 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms