RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 RPL15P61313 204 aaKnown RBP8.59□□□□□ -1.03
COL4A4-201ENST00000396625 SPXQ9BT56 116 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 SRRM4A7MD48 611 aaKnown RBP8.59□□□□□ -1.03
COL4A4-201ENST00000396625 J3QW42 95 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 TFF2Q03403 129 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 IGHG4P01861 327 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 CXCL1P09341 107 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 NSUN5P1Q3KNT7 163 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 PIN1P1O15428 100 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 OR9G9P0C7N8 305 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 PILRAQ9UKJ1 303 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 VCYO14598 125 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 LINC01560Q8TB33 94 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 COL11A2P13942 1736 aaPredicted RBP8.58□□□□□ -1.04
COL4A4-201ENST00000396625 PAX8Q06710 450 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 FHL5Q5TD97 284 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 FAM90A1Q86YD7 464 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 EXOC3-AS1Q8N2X6 119 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
COL4A4-201ENST00000396625 NUP35Q8NFH5 326 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 DSCAMO60469 2012 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 TRAV25A0A0B4J276 109 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 C1QL2Q7Z5L3 287 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 RNF222A6NCQ9 220 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 RPL36AP83881 106 aaKnown RBP8.58□□□□□ -1.04
COL4A4-201ENST00000396625 NEGR1Q7Z3B1 354 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 RPL36ALQ969Q0 106 aaKnown RBP8.58□□□□□ -1.04
COL4A4-201ENST00000396625 C7orf69Q9H7B7 122 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 DOPEY1Q5JWR5 2465 aa8.58□□□□□ -1.04
COL4A4-201ENST00000396625 CEACAM8P31997 349 aaPredicted RBP8.57□□□□□ -1.04
COL4A4-201ENST00000396625 PRR31Q5SQ13 230 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 ZNF319Q9P2F9 582 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 TANC1Q9C0D5 1861 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 HAPLN4Q86UW8 402 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 ADAMTS7Q9UKP4 1686 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 PCNX3Q9H6A9 2034 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 TMEM158Q8WZ71 300 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 ZNF501Q96CX3 271 aaPredicted RBP8.57□□□□□ -1.04
COL4A4-201ENST00000396625 FAM90A9PA6NNJ1 464 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 A0A0G2JK05 382 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 F8W1H4 67 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 HAMPP81172 84 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 UTF1Q5T230 341 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 MMP23AO75900 390 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 LYZL1Q6UWQ5 148 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 FAM216BQ8N7L0 139 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 CRLF1O75462 422 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 ZNF876PQ49A33 203 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 A0A1W2PPI3 338 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 PRB1P04280 392 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 COX6A1P12074 109 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 ZNF497Q6ZNH5 498 aa8.57□□□□□ -1.04
COL4A4-201ENST00000396625 PRR19A6NJB7 356 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 C1QCP02747 245 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 C15orf32Q32M92 178 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 IGHV2OR16-5A0A0B4J2B6 119 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 PATE3B3GLJ2 98 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 CECR9P0C854 216 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 CDCP2Q5VXM1 449 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 A0A1B0GW64 132 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 UPK2O00526 184 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 MPZP25189 248 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 MBNL3Q9NUK0 354 aaKnown RBP8.56□□□□□ -1.04
COL4A4-201ENST00000396625 TSSC4Q9Y5U2 329 aaPredicted RBP8.56□□□□□ -1.04
COL4A4-201ENST00000396625 NRXN2Q9P2S2 1712 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 CD5P06127 495 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 MORN5Q5VZ52 161 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 SLC22A18ASQ8N1D0 253 aa8.56□□□□□ -1.04
COL4A4-201ENST00000396625 C14orf178Q8N769 122 aaPredicted RBP8.56□□□□□ -1.04
COL4A4-201ENST00000396625 PMS2P5A8MQ11 134 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 IGFBP3P17936 291 aaPredicted RBP8.55□□□□□ -1.04
COL4A4-201ENST00000396625 F8VVB4 439 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 F8VWA3 439 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 SH2D1AO60880 128 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 GREM1O60565 184 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 SAP30O75446 220 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 SLC25A28Q96A46 364 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 ATG2AQ2TAZ0 1938 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 SHISA9B4DS77 424 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 RPL35AP18077 110 aaKnown RBP8.55□□□□□ -1.04
COL4A4-201ENST00000396625 RNF126Q9BV68 326 aa8.55□□□□□ -1.04
COL4A4-201ENST00000396625 WISP3O95389 354 aaPredicted RBP8.54□□□□□ -1.04
COL4A4-201ENST00000396625 CELA3BP08861 270 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 FAM201AQ5SY85 155 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 NEU4Q8WWR8 484 aaPredicted RBP8.54□□□□□ -1.04
COL4A4-201ENST00000396625 TRBV24-1A0A075B6N3 115 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 AZU1P20160 251 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 TMEM133Q9H2Q1 129 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 IL18BPO95998 194 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 NBL1P41271 181 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 TMEM256Q8N2U0 113 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 IGHV3-53P01767 116 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 LY6G5BQ8NDX9 201 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 PRSS22Q9GZN4 317 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 SMKR1H3BMG3 65 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 YPEL1O60688 119 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 CD160O95971 181 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms