RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 ARL16Q0P5N6 197 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 LCN12Q6JVE5 192 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 TMEM144Q7Z5S9 345 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 UHRF2Q96PU4 802 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 IFI27L2Q9H2X8 130 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 SLC25A22Q9H936 323 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 NRN1Q9NPD7 142 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 ZNF586Q9NXT0 402 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 CCL24O00175 119 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 RAB29O14966 203 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 PAGE4O60829 102 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 GNRHRP30968 328 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 ID3Q02535 119 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 SELENOHQ8IZQ5 122 aaKnown RBP6.91□□□□□ -1.3
PTPN20-205ENST00000395721 RPP25LQ8N5L8 163 aaKnown RBP6.91□□□□□ -1.3
PTPN20-205ENST00000395721 SMIM12Q96EX1 92 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 TMEM56Q96MV1 263 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 TMEM222Q9H0R3 208 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
PTPN20-205ENST00000395721 ZNF580Q9UK33 172 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 TMEM56-RWDD3S4R434 201 aa6.91□□□□□ -1.3
PTPN20-205ENST00000395721 K7ERU9 68 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 HLA-DRB1P01911 266 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 HOXD3P31249 432 aaPredicted RBP6.9□□□□□ -1.3
PTPN20-205ENST00000395721 AMTP48728 403 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 PLGLAQ15195 96 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 C5orf64Q2M2E5 130 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 LCNL1Q6ZST4 164 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 TBC1D26Q86UD7 250 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 NIT1Q86X76 327 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 ZNF114Q8NC26 417 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 DUX3Q96PT4 197 aa6.9□□□□□ -1.3
PTPN20-205ENST00000395721 IGLC7A0M8Q6 106 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 GAGE12BA1L429 117 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 IGHG4P01861 327 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 IGF1P05019 195 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 IAPPP10997 89 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 DEFA4P12838 97 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 HERV-K104P61576 105 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 RPL39P5Q59GN2 51 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 HAPLN4Q86UW8 402 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 RAX2Q96IS3 184 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 DERL1Q9BUN8 251 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 OR1A1Q9P1Q5 309 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 WASHC3Q9Y3C0 194 aa6.9□□□□□ -1.31
PTPN20-205ENST00000395721 MRPS16Q9Y3D3 137 aaKnown RBP6.9□□□□□ -1.31
PTPN20-205ENST00000395721 TMEM250H0YL14 139 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 ATP6V0E1O15342 81 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 CNTFRP26992 372 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 MC5RP33032 325 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 RHOGP84095 191 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 KIR2DS1Q14954 304 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 KIAA1644Q3SXP7 199 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 FAM19A2Q8N3H0 131 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 TCTEX1D1Q8N7M0 179 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 RNF152Q8N8N0 203 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 CCDC71LQ8N9Z2 235 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 ABHD14BQ96IU4 210 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 SPIN2AQ99865 258 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 SPIN2BQ9BPZ2 258 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 TRAV41A0A0B4J266 112 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 K7EIL1 84 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 FCN1O00602 326 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 RBFOX2O43251 390 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTPN20-205ENST00000395721 APOA2P02652 100 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 ESDP10768 282 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 YPEL3P61236 119 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-205ENST00000395721 CFHR3Q02985 330 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 DEFB136Q30KP8 78 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 DEFB121Q5J5C9 76 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 NPBQ8NG41 125 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 C4orf3Q8WVX3 66 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 GNB4Q9HAV0 340 aa6.89□□□□□ -1.31
PTPN20-205ENST00000395721 CORTO00230 105 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 TAX1BP3O14907 124 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 ZNF253O75346 499 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 NDUFA3O95167 84 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 SCTP09683 121 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 ECSCRQ19T08 205 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 OR4C12Q96R67 309 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 FBXL15Q9H469 300 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 TGP01266 2768 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 IGHV7-81A0A0B4J1V7 117 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 A0A0G2JRQ6 117 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 WI2-2373I1.2A0A1W2PRP0 233 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 H0YJW9 148 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 RRHO14718 337 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 GNG7O60262 68 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 SPINK4O60575 86 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 KRASP01116 189 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 CT45A6P0DMU7 189 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 CT45A5P0DMU8 189 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 CT45A7P0DMV0 189 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 NTF3P20783 257 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 KRTAP10-11P60412 298 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 ZNF90Q03938 601 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 EGFEM1PQ0D2K5 195 aa6.88□□□□□ -1.31
PTPN20-205ENST00000395721 NMSQ5H8A3 153 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms