RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 FSTL3O95633 263 aa11.44□□□□□ -0.58
CLIP2-203ENST00000395060 GUSBP1Q15486 140 aa11.44□□□□□ -0.58
CLIP2-203ENST00000395060 M0R3E3 92 aa11.44□□□□□ -0.58
CLIP2-203ENST00000395060 NMUP48645 174 aa11.44□□□□□ -0.58
CLIP2-203ENST00000395060 LYPD2Q6UXB3 125 aa11.44□□□□□ -0.58
CLIP2-203ENST00000395060 ATP5L2Q7Z4Y8 100 aa11.44□□□□□ -0.58
CLIP2-203ENST00000395060 THYN1Q9P016 225 aa11.44□□□□□ -0.58
CLIP2-203ENST00000395060 SMKR1H3BMG3 65 aa11.44□□□□□ -0.58
CLIP2-203ENST00000395060 SUB1P53999 127 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLIP2-203ENST00000395060 OR4C13Q8NGP0 309 aa11.44□□□□□ -0.58
CLIP2-203ENST00000395060 OSR1Q8TAX0 266 aaPredicted RBP11.44□□□□□ -0.58
CLIP2-203ENST00000395060 TNFRSF1AP19438 455 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 TMEM200BQ69YZ2 307 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 SEM1Q6ZVN7 128 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 C5orf17Q8NAS9 161 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 FAM222BQ8WU58 562 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 C18orf15Q96N68 181 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 MLST8Q9BVC4 326 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 RHOGP84095 191 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 ZNF788Q6ZQV5 615 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 SMIM15Q7Z3B0 74 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 NEU4Q8WWR8 484 aaPredicted RBP11.43□□□□□ -0.58
CLIP2-203ENST00000395060 CHCHD1Q96BP2 118 aaKnown RBP11.43□□□□□ -0.58
CLIP2-203ENST00000395060 TTTY13Q9BZ97 58 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 PLSCR4Q9NRQ2 329 aa11.43□□□□□ -0.58
CLIP2-203ENST00000395060 C2orf91Q6ZV80 131 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 HSPB8Q9UJY1 196 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 TRAV17A0A0B4J275 112 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 TMEM213A2RRL7 107 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 FCN3O75636 299 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 GLRXP35754 106 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 MYCNOSP40205 109 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 CACNG7P62955 275 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 HIST1H1AQ02539 215 aaPredicted RBP11.42□□□□□ -0.58
CLIP2-203ENST00000395060 JMJD8Q96S16 334 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 RAB9BQ9NP90 201 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 ZGRF1Q86YA3 2104 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 IGHV3OR16-8A0A075B7F1 116 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 PIP4P1Q86T03 277 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 RABAC1Q9UI14 185 aa11.42□□□□□ -0.58
CLIP2-203ENST00000395060 C19orf71A6NCJ1 209 aa11.41□□□□□ -0.58
CLIP2-203ENST00000395060 CRXO43186 299 aaPredicted RBP11.41□□□□□ -0.58
CLIP2-203ENST00000395060 LTAP01374 205 aa11.41□□□□□ -0.58
CLIP2-203ENST00000395060 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
CLIP2-203ENST00000395060 Q86TA4 180 aa11.41□□□□□ -0.58
CLIP2-203ENST00000395060 PRSS22Q9GZN4 317 aa11.41□□□□□ -0.58
CLIP2-203ENST00000395060 ZNF207O43670 478 aaKnown RBP11.41□□□□□ -0.58
CLIP2-203ENST00000395060 ZNF833PQ6ZTB9 187 aa11.41□□□□□ -0.58
CLIP2-203ENST00000395060 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
CLIP2-203ENST00000395060 COL12A1Q99715 3063 aa11.41□□□□□ -0.58
CLIP2-203ENST00000395060 SPTBN1Q01082 2364 aaKnown RBP11.41□□□□□ -0.58
CLIP2-203ENST00000395060 A0A1B0GUT8 65 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 K7ERU9 68 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 CD5LO43866 347 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 GP9P14770 177 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 AMN1Q8IY45 258 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 C1orf162Q8NEQ5 155 aaPredicted RBP11.4□□□□□ -0.58
CLIP2-203ENST00000395060 D6R8Y8 96 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 PET117Q6UWS5 81 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 BCL6BQ8N143 479 aaPredicted RBP11.4□□□□□ -0.58
CLIP2-203ENST00000395060 ZADH2Q8N4Q0 377 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 FMC1Q96HJ9 113 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 C8orf49Q96NF6 230 aa11.4□□□□□ -0.58
CLIP2-203ENST00000395060 PLGLAQ15195 96 aa11.4□□□□□ -0.59
CLIP2-203ENST00000395060 KLF17Q5JT82 389 aaPredicted RBP11.4□□□□□ -0.59
CLIP2-203ENST00000395060 IGFL4Q6B9Z1 124 aa11.4□□□□□ -0.59
CLIP2-203ENST00000395060 PCP2Q8IVA1 136 aa11.4□□□□□ -0.59
CLIP2-203ENST00000395060 TMEM167AQ8TBQ9 72 aa11.4□□□□□ -0.59
CLIP2-203ENST00000395060 ZNF747Q9BV97 191 aa11.4□□□□□ -0.59
CLIP2-203ENST00000395060 HIGD1AQ9Y241 93 aa11.4□□□□□ -0.59
CLIP2-203ENST00000395060 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 ARHGAP32A7KAX9 2087 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 K7EM74 188 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 IGHG3P01860 377 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 LINC00312Q9Y6C7 94 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 IGLV2-23P01705 113 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 PPBPP02775 128 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 COX8AP10176 69 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 COX7A1P24310 79 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 VMA21Q3ZAQ7 101 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 FAM162BQ5T6X4 162 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 CSTL1Q9H114 145 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 FBXL15Q9H469 300 aa11.39□□□□□ -0.59
CLIP2-203ENST00000395060 IGHV3-35A0A0C4DH35 117 aa11.38□□□□□ -0.59
CLIP2-203ENST00000395060 RPL27AP46776 148 aaKnown RBP11.38□□□□□ -0.59
CLIP2-203ENST00000395060 KLF12Q9Y4X4 402 aa11.38□□□□□ -0.59
CLIP2-203ENST00000395060 IGLC1P0CG04 106 aa11.38□□□□□ -0.59
CLIP2-203ENST00000395060 NDFIP1Q9BT67 221 aa11.38□□□□□ -0.59
CLIP2-203ENST00000395060 TMEM133Q9H2Q1 129 aa11.38□□□□□ -0.59
CLIP2-203ENST00000395060 RPL24P83731 157 aaKnown RBP11.38□□□□□ -0.59
CLIP2-203ENST00000395060 KIR3DS1Q14943 382 aa11.38□□□□□ -0.59
CLIP2-203ENST00000395060 FER1L6-AS1Q8NA97 138 aa11.38□□□□□ -0.59
CLIP2-203ENST00000395060 OR10AG1Q8NH19 301 aa11.38□□□□□ -0.59
CLIP2-203ENST00000395060 VSTM2AQ8TAG5 236 aa11.38□□□□□ -0.59
CLIP2-203ENST00000395060 ZNF785A8K8V0 405 aa11.37□□□□□ -0.59
CLIP2-203ENST00000395060 CSN1S1P47710 185 aa11.37□□□□□ -0.59
CLIP2-203ENST00000395060 LINC01545Q5VT33 79 aa11.37□□□□□ -0.59
CLIP2-203ENST00000395060 STXBP6Q8NFX7 210 aa11.37□□□□□ -0.59
CLIP2-203ENST00000395060 SLC25A39Q9BZJ4 359 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms