RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GATD1Q8NB37 220 aa8.46□□□□□ -1.06
COL4A6-203ENST00000394872 LAMTOR2Q9Y2Q5 125 aa8.46□□□□□ -1.06
COL4A6-203ENST00000394872 IGKV1-5P01602 117 aa8.46□□□□□ -1.06
COL4A6-203ENST00000394872 PSG3Q16557 428 aa8.46□□□□□ -1.06
COL4A6-203ENST00000394872 Q71RC1 249 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-203ENST00000394872 PRTN3P24158 256 aa8.46□□□□□ -1.06
COL4A6-203ENST00000394872 DAZ1Q9NQZ3 744 aaKnown RBP8.46□□□□□ -1.06
COL4A6-203ENST00000394872 OVOL3O00110 214 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 PAX4O43316 350 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 LINC00205P59089 165 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 SUPT4H1P63272 117 aaKnown RBP8.45□□□□□ -1.06
COL4A6-203ENST00000394872 PRR31Q5SQ13 230 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 SPTA1P02549 2419 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 DEFB131AP59861 70 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 LHFPL1Q86WI0 220 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 NDUFAF3Q9BU61 184 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 TRAV8-4A0A0B4J246 113 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 LINC01619G3V211 115 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 RASL10AQ92737 203 aa8.45□□□□□ -1.06
COL4A6-203ENST00000394872 RTTNQ86VV8 2226 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 TMEM238C9JI98 176 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 CEP290O15078 2479 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 TNFSF13O75888 250 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 KIF26BQ2KJY2 2108 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 UBE2E1P51965 193 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 C1orf159Q96HA4 380 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 AGMATQ9BSE5 352 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 SMPXQ9UHP9 88 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 COL4A6Q14031 1691 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 VCYO14598 125 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 HGFACQ04756 655 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 ORAOV1Q8WV07 137 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 CSTL1Q9H114 145 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 ERG28Q9UKR5 140 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 TRBV6-6A0A0A6YYG2 114 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 FGF16O43320 207 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 ATXN8Q156A1 80 aa8.44□□□□□ -1.06
COL4A6-203ENST00000394872 C14orf178Q8N769 122 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-203ENST00000394872 IGHV1-69DA0A0B4J2H0 117 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 IGHV1-69P01742 117 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 NTF4P34130 210 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 FAM186AA6NE01 2351 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 A0A087WWL8 130 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 GATA4P43694 442 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 SS18Q15532 418 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 ZDBF2Q9HCK1 2354 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 NMSQ5H8A3 153 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 RNF144BQ7Z419 303 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 RPRMLQ8N4K4 120 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 FAM110DQ8TAY7 271 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-203ENST00000394872 SDK2Q58EX2 2172 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 ATP6V0E1O15342 81 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 ZNF581Q9P0T4 197 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 THSD7BQ9C0I4 1608 aa8.43□□□□□ -1.06
COL4A6-203ENST00000394872 SRSF8Q9BRL6 282 aaKnown RBP8.43□□□□□ -1.06
COL4A6-203ENST00000394872 HIST1H2BKO60814 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST1H2BJP06899 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST1H2BOP23527 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST1H2BBP33778 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST1H2BDP58876 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST1H2BCP62807 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST2H2BEQ16778 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-203ENST00000394872 TMEM14EPQ6UXP3 125 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST1H2BHQ93079 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST1H2BNQ99877 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 HIST1H2BMQ99879 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 ZNRD1Q9P1U0 126 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 CFHR3Q02985 330 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 LYPD1Q8N2G4 141 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 IGKV1-16P04430 117 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 RNASE2P10153 161 aaKnown RBP8.42□□□□□ -1.06
COL4A6-203ENST00000394872 RFNGQ9Y644 331 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 CR1LQ2VPA4 569 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 GLRX5Q86SX6 157 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 DMRTC2Q8IXT2 367 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-203ENST00000394872 FREM3P0C091 2139 aa8.42□□□□□ -1.06
COL4A6-203ENST00000394872 IGHV2-70DA0A0C4DH43 119 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 F5H768 121 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 F8WEM9 126 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 RASL11AQ6T310 242 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 IL17RELQ6ZVW7 336 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 DAD1P61803 113 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 SEC11AP67812 179 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 HSD52Q0P140 79 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 XCL2Q9UBD3 114 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 LAMTOR3Q9UHA4 124 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-203ENST00000394872 INS-IGF2F8WCM5 200 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 NUP35Q8NFH5 326 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 TICRRQ7Z2Z1 1910 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 A8MWV9 139 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 FNDC1Q4ZHG4 1894 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-203ENST00000394872 GBF1Q92538 1859 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 MLANAQ16655 118 aa8.41□□□□□ -1.06
COL4A6-203ENST00000394872 FOXL2NBQ6ZUU3 175 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms