RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 FAM162BQ5T6X4 162 aa14.6□□□□□ -0.07
PCDHA1-202ENST00000394633 RBPMS2Q6ZRY4 209 aaKnown RBP14.6□□□□□ -0.07
PCDHA1-202ENST00000394633 LINC00173Q6ZV60 143 aa14.6□□□□□ -0.07
PCDHA1-202ENST00000394633 GFRA4Q9GZZ7 299 aa14.6□□□□□ -0.07
PCDHA1-202ENST00000394633 SIGLEC9Q9Y336 463 aa14.6□□□□□ -0.07
PCDHA1-202ENST00000394633 PAX2Q02962 417 aa14.59□□□□□ -0.07
PCDHA1-202ENST00000394633 Q6ZVH6 145 aa14.59□□□□□ -0.07
PCDHA1-202ENST00000394633 Q71RC1 249 aaPredicted RBP14.59□□□□□ -0.07
PCDHA1-202ENST00000394633 Q86TA4 180 aa14.59□□□□□ -0.07
PCDHA1-202ENST00000394633 ORAOV1Q8WV07 137 aa14.59□□□□□ -0.07
PCDHA1-202ENST00000394633 RNASE6Q93091 150 aaKnown RBP14.59□□□□□ -0.07
PCDHA1-202ENST00000394633 DAZAP1Q96EP5 407 aaKnown RBP14.59□□□□□ -0.07
PCDHA1-202ENST00000394633 HIGD1AQ9Y241 93 aa14.59□□□□□ -0.07
PCDHA1-202ENST00000394633 TRAV8-1A0A0A6YYK1 113 aa14.58□□□□□ -0.07
PCDHA1-202ENST00000394633 NPIPB6E9PJ23 425 aa14.58□□□□□ -0.07
PCDHA1-202ENST00000394633 ADORA2A-AS1P86434 159 aa14.58□□□□□ -0.07
PCDHA1-202ENST00000394633 PRB3Q04118 309 aaPredicted RBP14.58□□□□□ -0.07
PCDHA1-202ENST00000394633 UNQ5815/PRO19632Q6UWF5 114 aa14.58□□□□□ -0.07
PCDHA1-202ENST00000394633 CHCHD1Q96BP2 118 aaKnown RBP14.58□□□□□ -0.07
PCDHA1-202ENST00000394633 F11RQ9Y624 299 aaKnown RBP14.58□□□□□ -0.07
PCDHA1-202ENST00000394633 FLNCQ14315 2725 aa14.58□□□□□ -0.08
PCDHA1-202ENST00000394633 TEX22C9J3V5 150 aa14.58□□□□□ -0.08
PCDHA1-202ENST00000394633 CRXO43186 299 aaPredicted RBP14.58□□□□□ -0.08
PCDHA1-202ENST00000394633 CIARTQ8N365 385 aaPredicted RBP14.58□□□□□ -0.08
PCDHA1-202ENST00000394633 OTORQ9NRC9 128 aa14.58□□□□□ -0.08
PCDHA1-202ENST00000394633 OR4C46A6NHA9 309 aa14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 FAM90A27PA6NNH2 459 aa14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 PSG1P11464 419 aa14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 GRNP28799 593 aaKnown RBP14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 LYZP61626 148 aa14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 RBM14Q96PK6 669 aaKnown RBP14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 C1RLQ9NZP8 487 aa14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 LOC102724200A0A096LPH7 203 aaPredicted RBP14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 IGLV2-11P01706 119 aa14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 MUC15Q8N387 334 aa14.57□□□□□ -0.08
PCDHA1-202ENST00000394633 SYS1-DBNDD2H3BUS1 97 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 IGLC1P0CG04 106 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 UQCRFS1P47985 274 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 EXOC3-AS1Q8N2X6 119 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 SLC25A39Q9BZJ4 359 aaPredicted RBP14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 TP73-AS1Q9UF72 201 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 HRNRQ86YZ3 2850 aaPredicted RBP14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 ABCA4P78363 2273 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 IGHV1-3A0A0C4DH29 117 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 FAM231BA6NCW3 169 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 OVOL3O00110 214 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 IGLV1-47P01700 117 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 APOHP02749 345 aaPredicted RBP14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 COL8A1P27658 744 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 RELQ04864 619 aaPredicted RBP14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 PPP1R27Q86WC6 154 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 NDFIP1Q9BT67 221 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 DYNLRB1Q9NP97 96 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 TMEM14CQ9P0S9 112 aa14.56□□□□□ -0.08
PCDHA1-202ENST00000394633 DCHS2Q6V1P9 2916 aa14.55□□□□□ -0.08
PCDHA1-202ENST00000394633 CHEK1O14757 476 aa14.55□□□□□ -0.08
PCDHA1-202ENST00000394633 CCL25O15444 150 aa14.55□□□□□ -0.08
PCDHA1-202ENST00000394633 TOX4O94842 621 aa14.55□□□□□ -0.08
PCDHA1-202ENST00000394633 LEPROTL1O95214 131 aa14.55□□□□□ -0.08
PCDHA1-202ENST00000394633 GOLT1AQ6ZVE7 132 aa14.55□□□□□ -0.08
PCDHA1-202ENST00000394633 PRNTQ86SH4 94 aa14.55□□□□□ -0.08
PCDHA1-202ENST00000394633 COX11Q9Y6N1 276 aa14.55□□□□□ -0.08
PCDHA1-202ENST00000394633 IGHV1-69-2A0A0G2JMI3 117 aa14.54□□□□□ -0.08
PCDHA1-202ENST00000394633 ZNF785A8K8V0 405 aa14.54□□□□□ -0.08
PCDHA1-202ENST00000394633 HOXB4P17483 251 aaPredicted RBP14.54□□□□□ -0.08
PCDHA1-202ENST00000394633 C16orf54Q6UWD8 224 aa14.54□□□□□ -0.08
PCDHA1-202ENST00000394633 TNFRSF14Q92956 283 aa14.54□□□□□ -0.08
PCDHA1-202ENST00000394633 INSIG2Q9Y5U4 225 aa14.54□□□□□ -0.08
PCDHA1-202ENST00000394633 E7EQL1 145 aa14.54□□□□□ -0.08
PCDHA1-202ENST00000394633 HAX1O00165 279 aa14.54□□□□□ -0.08
PCDHA1-202ENST00000394633 FBXL15Q9H469 300 aa14.54□□□□□ -0.08
PCDHA1-202ENST00000394633 hDV102S1A0JD36 115 aa14.53□□□□□ -0.08
PCDHA1-202ENST00000394633 SHISA9B4DS77 424 aa14.53□□□□□ -0.08
PCDHA1-202ENST00000394633 I3L2K1 104 aa14.53□□□□□ -0.08
PCDHA1-202ENST00000394633 ZNF138P52744 262 aa14.53□□□□□ -0.08
PCDHA1-202ENST00000394633 VSTM5A8MXK1 200 aa14.53□□□□□ -0.08
PCDHA1-202ENST00000394633 PTTG1IPP53801 180 aa14.53□□□□□ -0.08
PCDHA1-202ENST00000394633 SRSF12Q8WXF0 261 aaKnown RBP14.53□□□□□ -0.08
PCDHA1-202ENST00000394633 ST20Q9HBF5 79 aa14.53□□□□□ -0.08
PCDHA1-202ENST00000394633 ABCA1O95477 2261 aa14.52□□□□□ -0.08
PCDHA1-202ENST00000394633 BUB1B-PAK6H3BSN5 160 aa14.52□□□□□ -0.08
PCDHA1-202ENST00000394633 RBP4P02753 201 aa14.52□□□□□ -0.08
PCDHA1-202ENST00000394633 SPTAN1Q13813 2472 aaKnown RBP14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 ZNF738Q8NE65 137 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 MYO18BQ8IUG5 2567 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 TRBV6-1A0A0K0K1D8 114 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 IGKV1-17P01599 117 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 ZC2HC1AQ96GY0 325 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 C17orf77Q96MU5 243 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 ASCL2Q99929 193 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 RASL11BQ9BPW5 248 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 RALYQ9UKM9 306 aaKnown RBP14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 CBY1Q9Y3M2 126 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 ZNF462Q96JM2 2506 aa14.51□□□□□ -0.09
PCDHA1-202ENST00000394633 LIPFP07098 398 aa14.5□□□□□ -0.09
PCDHA1-202ENST00000394633 OR5AL1P0C617 328 aa14.5□□□□□ -0.09
PCDHA1-202ENST00000394633 GNLYP22749 145 aa14.5□□□□□ -0.09
PCDHA1-202ENST00000394633 UBE2V1Q13404 147 aa14.5□□□□□ -0.09
PCDHA1-202ENST00000394633 LINC01560Q8TB33 94 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms