RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 IGHV3-72A0A0B4J1Y9 119 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 H7C2G1 150 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 FOXH1O75593 365 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 IGKV1-5P01602 117 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 COX8AP10176 69 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 HERV-K104P63124 156 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 EFNB3Q15768 340 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 ZNF672Q499Z4 452 aaPredicted RBP4.64□□□□□ -1.67
RFFL-202ENST00000394597 PRNTQ86SH4 94 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 OR4C13Q8NGP0 309 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 TMUB1Q9BVT8 246 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 TMEM160Q9NX00 188 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 LY96Q9Y6Y9 160 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 NCOA6Q14686 2063 aaPredicted RBP4.64□□□□□ -1.67
RFFL-202ENST00000394597 F8W1H4 67 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 F2RL2O00254 374 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 CCL3L1P16619 93 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 ANOS1P23352 680 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 GATA4P43694 442 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 LGALS7P47929 136 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 ARPC1AQ92747 370 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 RASL11BQ9BPW5 248 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 USF3Q68DE3 2245 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 PTPN13Q12923 2485 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 MED12LQ86YW9 2145 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 TRANK1O15050 2925 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 SAA2-SAA4A0A096LPE2 208 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 SMAD7O15105 426 aaKnown RBP4.64□□□□□ -1.67
RFFL-202ENST00000394597 CTRLP40313 264 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 ANXA2RQ3ZCQ2 193 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 RASL11AQ6T310 242 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 C20orf204Q6ZNR8 217 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 Q8NA96 180 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 NUP35Q8NFH5 326 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 COQ2Q96H96 371 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 VGLL1Q99990 258 aa4.64□□□□□ -1.67
RFFL-202ENST00000394597 RPP21Q9H633 154 aaKnown RBP4.64□□□□□ -1.67
RFFL-202ENST00000394597 PEX7O00628 323 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 CFHR2P36980 270 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 VWC2Q2TAL6 325 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 RBPMS2Q6ZRY4 209 aaKnown RBP4.63□□□□□ -1.67
RFFL-202ENST00000394597 TCF19Q9Y242 345 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 A0A1B0GUT8 65 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 H3BMG7 143 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 RPL27AP46776 148 aaKnown RBP4.63□□□□□ -1.67
RFFL-202ENST00000394597 TWIST1Q15672 202 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 SPATA31B1PQ5VZV4 182 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 SH2D6Q7Z4S9 175 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 VKORC1L1Q8N0U8 176 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 OSR1Q8TAX0 266 aaPredicted RBP4.63□□□□□ -1.67
RFFL-202ENST00000394597 ZNF502Q8TBZ5 544 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 GAFA1Q96PS6 74 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 ZNF256Q9Y2P7 627 aaPredicted RBP4.63□□□□□ -1.67
RFFL-202ENST00000394597 V9GYV3 84 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 OR11H12B2RN74 326 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 NPIPB11E5RHQ5 1161 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 RBP4P02753 201 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 WNT2P09544 360 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 NPPCP23582 126 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 OR11H1Q8NG94 326 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 OR11H2Q8NH07 326 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 Q8TCH9 128 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 GGTLC1Q9BX51 225 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 DPM3Q9P2X0 92 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 RPUSD1Q9UJJ7 312 aaKnown RBP4.63□□□□□ -1.67
RFFL-202ENST00000394597 CSPG4Q6UVK1 2322 aa4.63□□□□□ -1.67
RFFL-202ENST00000394597 KIAA1549Q9HCM3 1950 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 DYSFO75923 2080 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 C5orf42Q9H799 3197 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 FOXI3A8MTJ6 420 aaPredicted RBP4.62□□□□□ -1.67
RFFL-202ENST00000394597 FAM106CPP0CH98 169 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 PRTN3P24158 256 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 DUTP33316 252 aaKnown RBP4.62□□□□□ -1.67
RFFL-202ENST00000394597 PSMG4Q5JS54 123 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 TREML4Q6UXN2 200 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 FAM168AQ92567 244 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 PRELID3AQ96N28 172 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 TMEM133Q9H2Q1 129 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 GAGE12JA6NER3 117 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 A8MWV9 139 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 H0YJW9 148 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 H3BTX0 84 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 GAGE7O76087 117 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 GAGE12FP0CL80 117 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 GAGE12GP0CL81 117 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 GAGE12IP0CL82 117 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 COL8A2P25067 703 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 EFNA4P52798 201 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 GAGE4Q13068 117 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 ZNF585BQ52M93 769 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 TMEM200BQ69YZ2 307 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 PCSK4Q6UW60 755 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 AMTNQ6UX39 209 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 IFI27L1Q96BM0 104 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 NDFIP1Q9BT67 221 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 C19orf24Q9BVV8 132 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 FGF23Q9GZV9 251 aaPredicted RBP4.62□□□□□ -1.67
RFFL-202ENST00000394597 TP73-AS1Q9UF72 201 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 IGHV1-24A0A0C4DH33 117 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms