RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 Q8NFD4 153 aa11.69□□□□□ -0.54
PPARGC1B-203ENST00000394320 NPIPB5A8MRT5 1133 aa11.69□□□□□ -0.54
PPARGC1B-203ENST00000394320 SMIM13P0DJ93 91 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 ADMP35318 185 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 C1orf122Q6ZSJ8 110 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 ATOH7Q8N100 152 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 NDUFA4L2Q9NRX3 87 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 WISP1O95388 367 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 COTL1Q14019 142 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 PSG3Q16557 428 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 C8orf31Q8N9H6 132 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 ZNF415Q09FC8 603 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 C5orf24Q7Z6I8 188 aa11.68□□□□□ -0.54
PPARGC1B-203ENST00000394320 EMP1P54849 157 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 C17orf58Q2M2W7 97 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 SMPXQ9UHP9 88 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 PCNX1Q96RV3 2341 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 DOPEY2Q9Y3R5 2298 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 IGKV2-40A0A087WW87 121 aaPredicted RBP11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 IGKV2D-40P01614 121 aaPredicted RBP11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 CFAP161Q6P656 301 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 RHPN1-AS1Q9BWJ2 59 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 ZNF503-AS2A6NEH8 195 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 DNAL4O96015 105 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 LCN12Q6JVE5 192 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 PGPEP1LA6NFU8 196 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 KLHL30-AS1Q8NEE0 82 aa11.67□□□□□ -0.54
PPARGC1B-203ENST00000394320 AMBPP02760 352 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 C1QL4Q86Z23 238 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 HTN3P15516 51 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 C1orf194Q5T5A4 169 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 ZNF688P0C7X2 276 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 CD33P20138 364 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 CNTFRP26992 372 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 PRADC1Q9BSG0 188 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 SSBP4Q9BWG4 385 aaPredicted RBP11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 GHRHP01286 108 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 C11orf44Q8N8P7 122 aa11.66□□□□□ -0.54
PPARGC1B-203ENST00000394320 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.54
PPARGC1B-203ENST00000394320 C15orf65H3BRN8 121 aa11.65□□□□□ -0.54
PPARGC1B-203ENST00000394320 DPM2O94777 84 aa11.65□□□□□ -0.54
PPARGC1B-203ENST00000394320 DOCK7Q96N67 2140 aa11.65□□□□□ -0.54
PPARGC1B-203ENST00000394320 CREBBPQ92793 2442 aa11.65□□□□□ -0.54
PPARGC1B-203ENST00000394320 POU2AF1Q16633 256 aa11.65□□□□□ -0.54
PPARGC1B-203ENST00000394320 FAM19A2Q8N3H0 131 aa11.65□□□□□ -0.54
PPARGC1B-203ENST00000394320 HIST1H2BKO60814 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 INSP01308 110 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST1H2BJP06899 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST1H2BOP23527 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST1H2BBP33778 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST1H2BDP58876 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST1H2BCP62807 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST2H2BEQ16778 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 LCNL1Q6ZST4 164 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST1H2BHQ93079 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST1H2BNQ99877 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 HIST1H2BMQ99879 126 aa11.65□□□□□ -0.55
PPARGC1B-203ENST00000394320 MUC6Q6W4X9 2439 aa11.64□□□□□ -0.55
PPARGC1B-203ENST00000394320 RCHY1Q96PM5 261 aa11.64□□□□□ -0.55
PPARGC1B-203ENST00000394320 OR13C6PQ8NH95 151 aa11.64□□□□□ -0.55
PPARGC1B-203ENST00000394320 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
PPARGC1B-203ENST00000394320 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 LINC00205P59089 165 aa11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 PLP1P60201 277 aa11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 BEX4Q9NWD9 120 aaPredicted RBP11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 TCF21O43680 179 aa11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 RPL36AP83881 106 aaKnown RBP11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 RPL36ALQ969Q0 106 aaKnown RBP11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.63□□□□□ -0.554e-7■■■□□ 15.5
PPARGC1B-203ENST00000394320 PPIFP30405 207 aaKnown RBP11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 ZNF329Q86UD4 541 aa11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 IFI27L1Q96BM0 104 aa11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 DPH3Q96FX2 82 aa11.63□□□□□ -0.55
PPARGC1B-203ENST00000394320 GFRA4Q9GZZ7 299 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 JKAMPQ9P055 326 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 LAMTOR2Q9Y2Q5 125 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 LTBP2Q14767 1821 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 TRAV9-2A0A087WT02 112 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 OVOL3O00110 214 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 SH2D1AO60880 128 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 LHFPL4Q7Z7J7 247 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 Q6ZSR3 168 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 NIT1Q86X76 327 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 ABCA1O95477 2261 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 FAM231BA6NCW3 169 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 SLC25A2Q9BXI2 301 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 SPRY4Q9C004 299 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 DOCK9Q9BZ29 2069 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 GTF3C1Q12789 2109 aa11.62□□□□□ -0.55
PPARGC1B-203ENST00000394320 CTAG1AP78358 180 aa11.61□□□□□ -0.55
PPARGC1B-203ENST00000394320 LAGE3Q14657 143 aa11.61□□□□□ -0.55
PPARGC1B-203ENST00000394320 LYZL1Q6UWQ5 148 aa11.61□□□□□ -0.55
PPARGC1B-203ENST00000394320 Q86TA4 180 aa11.61□□□□□ -0.55
PPARGC1B-203ENST00000394320 TOMM7Q9P0U1 55 aa11.61□□□□□ -0.55
PPARGC1B-203ENST00000394320 FCN3O75636 299 aa11.61□□□□□ -0.55
PPARGC1B-203ENST00000394320 CD28P10747 220 aa11.61□□□□□ -0.55
PPARGC1B-203ENST00000394320 WT1P19544 449 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms