RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 ZNF207O43670 478 aaKnown RBP13.39□□□□□ -0.27
SIPA1-201ENST00000394224 SAP30O75446 220 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 LHBP01229 141 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 IFI27P40305 119 aaPredicted RBP13.39□□□□□ -0.27
SIPA1-201ENST00000394224 OR4F17Q8NGA8 305 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 AP1S3Q96PC3 154 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 K7EP13 123 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 SPRY2O43597 315 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 TCRAP04437 139 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 C8orf49Q96NF6 230 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 ZFHX3Q15911 3703 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 FAM90A9PA6NNJ1 464 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 RELQ04864 619 aaPredicted RBP13.39□□□□□ -0.27
SIPA1-201ENST00000394224 ONECUT1Q9UBC0 465 aa13.39□□□□□ -0.27
SIPA1-201ENST00000394224 IGHV2-26A0A0B4J1V2 119 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 IGLC7A0M8Q6 106 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 LRRC10Q5BKY1 277 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 PRSS33Q8NF86 280 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 TMEM191AQ9H0A3 160 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 IL4P05112 153 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 RBX1P62877 108 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 TIMM23BQ5SRD1 257 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 RASL11BQ9BPW5 248 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 CTSZQ9UBR2 303 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 TRAV8-6A0A0B4J262 113 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 THYN1Q9P016 225 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 LY96Q9Y6Y9 160 aa13.38□□□□□ -0.27
SIPA1-201ENST00000394224 M0R296 226 aa13.37□□□□□ -0.27
SIPA1-201ENST00000394224 AMN1Q8IY45 258 aa13.37□□□□□ -0.27
SIPA1-201ENST00000394224 PNKDQ8N490 385 aa13.37□□□□□ -0.27
SIPA1-201ENST00000394224 OSR1Q8TAX0 266 aaPredicted RBP13.37□□□□□ -0.27
SIPA1-201ENST00000394224 TMEM133Q9H2Q1 129 aa13.37□□□□□ -0.27
SIPA1-201ENST00000394224 IGHG3P01860 377 aa13.37□□□□□ -0.27
SIPA1-201ENST00000394224 MTURNQ8N3F0 131 aa13.37□□□□□ -0.27
SIPA1-201ENST00000394224 AP5S1Q9NUS5 200 aa13.37□□□□□ -0.27
SIPA1-201ENST00000394224 HIGD1AQ9Y241 93 aa13.37□□□□□ -0.27
SIPA1-201ENST00000394224 RAI1Q7Z5J4 1906 aaPredicted RBP13.37□□□□□ -0.27
SIPA1-201ENST00000394224 H3BUT2 72 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 GOSR1O95249 250 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 EVI2AP22794 236 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 PSG9Q00887 426 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 TMEM108Q6UXF1 575 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 MRPL32Q9BYC8 188 aaKnown RBP13.36□□□□□ -0.27
SIPA1-201ENST00000394224 NCBP2LA6PVI3 153 aaKnown RBP13.36□□□□□ -0.27
SIPA1-201ENST00000394224 C2CD3Q4AC94 2353 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 IGKV2-40A0A087WW87 121 aaPredicted RBP13.36□□□□□ -0.27
SIPA1-201ENST00000394224 IGKV2D-40P01614 121 aaPredicted RBP13.36□□□□□ -0.27
SIPA1-201ENST00000394224 HLA-DMBP28068 263 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 CACNG7P62955 275 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 ADIPOQQ15848 244 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 AARDQ4LEZ3 155 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 RBPMS2Q6ZRY4 209 aaKnown RBP13.36□□□□□ -0.27
SIPA1-201ENST00000394224 LINC00312Q9Y6C7 94 aa13.36□□□□□ -0.27
SIPA1-201ENST00000394224 D6R8Y8 96 aa13.35□□□□□ -0.27
SIPA1-201ENST00000394224 LCNL1Q6ZST4 164 aa13.35□□□□□ -0.27
SIPA1-201ENST00000394224 VSTM2AQ8TAG5 236 aa13.35□□□□□ -0.27
SIPA1-201ENST00000394224 ORAOV1Q8WV07 137 aa13.35□□□□□ -0.27
SIPA1-201ENST00000394224 RAB9BQ9NP90 201 aa13.35□□□□□ -0.27
SIPA1-201ENST00000394224 PSMB11A5LHX3 300 aa13.35□□□□□ -0.27
SIPA1-201ENST00000394224 NPIPB5A8MRT5 1133 aa13.35□□□□□ -0.27
SIPA1-201ENST00000394224 GUSBP1Q15486 140 aa13.35□□□□□ -0.27
SIPA1-201ENST00000394224 PRR30Q53SZ7 412 aaPredicted RBP13.35□□□□□ -0.27
SIPA1-201ENST00000394224 IGHV1-69-2A0A0G2JMI3 117 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 RPEQ96AT9 228 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 C17orf100A8MU93 164 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 BVES-AS1Q5T3Y7 98 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 C5orf17Q8NAS9 161 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 CACNG8Q8WXS5 425 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 C7orf71A4D174 169 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 TAX1BP3O14907 124 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 FCER1GP30273 86 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 FAM120AOSQ5T036 256 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 BPIFA4PQ86YQ2 179 aa13.34□□□□□ -0.27
SIPA1-201ENST00000394224 MRPL27Q9P0M9 148 aaKnown RBP13.34□□□□□ -0.27
SIPA1-201ENST00000394224 OR2J3O76001 311 aa13.33□□□□□ -0.27
SIPA1-201ENST00000394224 KLRD1Q13241 179 aa13.33□□□□□ -0.27
SIPA1-201ENST00000394224 C1orf162Q8NEQ5 155 aaPredicted RBP13.33□□□□□ -0.27
SIPA1-201ENST00000394224 SFTA2Q6UW10 78 aa13.33□□□□□ -0.28
SIPA1-201ENST00000394224 LINC01560Q8TB33 94 aa13.33□□□□□ -0.28
SIPA1-201ENST00000394224 TMEM186Q96B77 213 aa13.33□□□□□ -0.28
SIPA1-201ENST00000394224 SLC25A39Q9BZJ4 359 aaPredicted RBP13.33□□□□□ -0.28
SIPA1-201ENST00000394224 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.33□□□□□ -0.28
SIPA1-201ENST00000394224 OR5AN1Q8NGI8 311 aa13.33□□□□□ -0.28
SIPA1-201ENST00000394224 CST9LQ9H4G1 147 aa13.33□□□□□ -0.28
SIPA1-201ENST00000394224 IGKV3-7A0A075B6H7 116 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 HLA-DRB1P01911 266 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 COTL1Q14019 142 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 ANKRD39Q53RE8 183 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 MSRB1Q9NZV6 116 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 GAGE12BA1L429 117 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 TWIST1Q15672 202 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 COX19Q49B96 90 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 MRPS16Q9Y3D3 137 aaKnown RBP13.32□□□□□ -0.28
SIPA1-201ENST00000394224 A0A1B0GUT8 65 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 ORM1P02763 201 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 GPR183P32249 361 aa13.32□□□□□ -0.28
SIPA1-201ENST00000394224 RPL24P83731 157 aaKnown RBP13.32□□□□□ -0.28
SIPA1-201ENST00000394224 GAGE10A6NGK3 116 aa13.31□□□□□ -0.28
SIPA1-201ENST00000394224 GAS8-AS1O95177 125 aa13.31□□□□□ -0.28
SIPA1-201ENST00000394224 CT45A10P0DMU9 189 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms