RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 TRBV12-3P01733 135 aa13.5□□□□□ -0.25
MBD4-202ENST00000393278 RANP62826 216 aaKnown RBP13.5□□□□□ -0.25
MBD4-202ENST00000393278 SCGB2A2Q13296 93 aa13.5□□□□□ -0.25
MBD4-202ENST00000393278 C10orf99Q6UWK7 81 aa13.5□□□□□ -0.25
MBD4-202ENST00000393278 OR4F17Q8NGA8 305 aa13.5□□□□□ -0.25
MBD4-202ENST00000393278 OR4X2Q8NGF9 303 aa13.5□□□□□ -0.25
MBD4-202ENST00000393278 TCEAL7Q9BRU2 100 aa13.5□□□□□ -0.25
MBD4-202ENST00000393278 IGHV3OR16-8A0A075B7F1 116 aa13.49□□□□□ -0.25
MBD4-202ENST00000393278 CLPSL1A2RUU4 121 aa13.49□□□□□ -0.25
MBD4-202ENST00000393278 RPL23P62829 140 aaKnown RBP13.49□□□□□ -0.25
MBD4-202ENST00000393278 TEX38Q6PEX7 206 aa13.49□□□□□ -0.25
MBD4-202ENST00000393278 C2CD4CQ8TF44 421 aa13.49□□□□□ -0.25
MBD4-202ENST00000393278 SMR3AQ99954 134 aa13.49□□□□□ -0.25
MBD4-202ENST00000393278 MYO9AB2RTY4 2548 aa13.49□□□□□ -0.25
MBD4-202ENST00000393278 ACANP16112 2415 aa13.48□□□□□ -0.25
MBD4-202ENST00000393278 SONP18583 2426 aaKnown RBP13.48□□□□□ -0.25
MBD4-202ENST00000393278 TRBV20OR9-2A0A075B6H5 130 aa13.48□□□□□ -0.25
MBD4-202ENST00000393278 A0A087WWC5 75 aa13.48□□□□□ -0.25
MBD4-202ENST00000393278 H3BTX0 84 aa13.48□□□□□ -0.25
MBD4-202ENST00000393278 FOXE3Q13461 319 aa13.48□□□□□ -0.25
MBD4-202ENST00000393278 ESM1Q9NQ30 184 aa13.48□□□□□ -0.25
MBD4-202ENST00000393278 SMCO4Q9NRQ5 59 aa13.48□□□□□ -0.25
MBD4-202ENST00000393278 SERTAD4Q9NUC0 356 aa13.48□□□□□ -0.25
MBD4-202ENST00000393278 TRBV19A0A075B6N1 114 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 ELANEP08246 267 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 RPL7P18124 248 aaKnown RBP13.47□□□□□ -0.25
MBD4-202ENST00000393278 RPL35P42766 123 aaKnown RBP13.47□□□□□ -0.25
MBD4-202ENST00000393278 ADIRFQ15847 76 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 Q9H3A6 140 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 PGPA6NDG6 321 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 FAM181BA6NEQ2 426 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 CLDN34H7C241 214 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 NDUFA4O00483 81 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 LINC01551Q86U37 167 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 MYOZ3Q8TDC0 251 aa13.47□□□□□ -0.25
MBD4-202ENST00000393278 C9JCJ5 164 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 PEX7O00628 323 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 BUB3O43684 328 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 LY6G6DO95868 133 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 RPL15P61313 204 aaKnown RBP13.46□□□□□ -0.26
MBD4-202ENST00000393278 OR8I2Q8N0Y5 310 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 RNF152Q8N8N0 203 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 HIST1H2BAQ96A08 127 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 METTL26Q96S19 204 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 TUBA4BQ9H853 241 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 OTORQ9NRC9 128 aa13.46□□□□□ -0.26
MBD4-202ENST00000393278 HELTA6NFD8 242 aa13.45□□□□□ -0.26
MBD4-202ENST00000393278 TSPAN4O14817 238 aa13.45□□□□□ -0.26
MBD4-202ENST00000393278 SLC25A5P05141 298 aaKnown RBP13.45□□□□□ -0.26
MBD4-202ENST00000393278 RPLP1P05386 114 aaKnown RBP13.45□□□□□ -0.26
MBD4-202ENST00000393278 SRD5A1P18405 259 aa13.45□□□□□ -0.26
MBD4-202ENST00000393278 LYPD1Q8N2G4 141 aa13.45□□□□□ -0.26
MBD4-202ENST00000393278 C5orf17Q8NAS9 161 aa13.45□□□□□ -0.26
MBD4-202ENST00000393278 TMEM190Q8WZ59 177 aa13.45□□□□□ -0.26
MBD4-202ENST00000393278 C17orf77Q96MU5 243 aa13.45□□□□□ -0.26
MBD4-202ENST00000393278 PEF1Q9UBV8 284 aaKnown RBP13.45□□□□□ -0.26
MBD4-202ENST00000393278 EPDR1Q9UM22 224 aa13.45□□□□□ -0.26
MBD4-202ENST00000393278 U3KQE9 123 aa13.45□□□□□ -0.26
MBD4-202ENST00000393278 GGCTO75223 188 aaKnown RBP13.44□□□□□ -0.26
MBD4-202ENST00000393278 PDE6HQ13956 83 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 C1orf194Q5T5A4 169 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 Q6ZSV7 163 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 CDC42EP3Q9UKI2 254 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 LY96Q9Y6Y9 160 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 OTOGQ6ZRI0 2925 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 PGPEP1LA6NFU8 196 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 GNG5P63218 68 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 RNF212Q495C1 297 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 UNQ9165/PRO28630Q6UXU0 137 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 SIGLEC15Q6ZMC9 328 aa13.44□□□□□ -0.26
MBD4-202ENST00000393278 SLC17A3O00476 420 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 ZNF207O43670 478 aaKnown RBP13.43□□□□□ -0.26
MBD4-202ENST00000393278 APOHP02749 345 aaPredicted RBP13.43□□□□□ -0.26
MBD4-202ENST00000393278 CNN1P51911 297 aaKnown RBP13.43□□□□□ -0.26
MBD4-202ENST00000393278 TAS2R60P59551 318 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 CENPWQ5EE01 88 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 EXOC3-AS1Q8N2X6 119 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 GPR82Q96P67 336 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 OR5B12Q96R08 314 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 ATG101Q9BSB4 218 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 CTDSP1Q9GZU7 261 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 TMEM242Q9NWH2 141 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 PRELID1Q9Y255 219 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 SMAD5-AS1Q9Y6J3 95 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 NOTCH2Q04721 2471 aa13.43□□□□□ -0.26
MBD4-202ENST00000393278 MT-ND4LP03901 98 aa13.42□□□□□ -0.26
MBD4-202ENST00000393278 RNASE1P07998 156 aaKnown RBP13.42□□□□□ -0.26
MBD4-202ENST00000393278 GNG4P50150 75 aa13.42□□□□□ -0.26
MBD4-202ENST00000393278 OCC1Q8TAD7 63 aa13.42□□□□□ -0.26
MBD4-202ENST00000393278 ZNF418Q8TF45 676 aaPredicted RBP13.42□□□□□ -0.26
MBD4-202ENST00000393278 ISOC2Q96AB3 205 aa13.42□□□□□ -0.26
MBD4-202ENST00000393278 IGF2BP2-AS1Q96M15 143 aa13.42□□□□□ -0.26
MBD4-202ENST00000393278 LINC00479Q96M42 142 aa13.42□□□□□ -0.26
MBD4-202ENST00000393278 AURKAIP1Q9NWT8 199 aaPredicted RBP13.42□□□□□ -0.26
MBD4-202ENST00000393278 A0A087X0K7 114 aa13.41□□□□□ -0.26
MBD4-202ENST00000393278 ATF4P18848 351 aaPredicted RBP13.41□□□□□ -0.26
MBD4-202ENST00000393278 C15orf54Q8N8G6 183 aa13.41□□□□□ -0.26
MBD4-202ENST00000393278 UBE2E2Q96LR5 201 aa13.41□□□□□ -0.26
MBD4-202ENST00000393278 IGHV3-66A0A0C4DH42 116 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms