RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 RPEL1Q2QD12 228 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 BAGE2Q86Y30 109 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 LYPD1Q8N2G4 141 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 ZNF502Q8TBZ5 544 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 TRBV19A0A075B6N1 114 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 A0A096LNT2 108 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 OR2T8A6NH00 312 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 SLC17A3O00476 420 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 AMY1AP04745 511 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 MGST1P10620 155 aaKnown RBP15.67■□□□□ 0.1
PTPN11-202ENST00000392597 S100A7P31151 101 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 RHOGP84095 191 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 C15orf32Q32M92 178 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 FAM231DQ6ZW35 169 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 TMEM219Q86XT9 240 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 FMC1Q96HJ9 113 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 MRPS12O15235 138 aaKnown RBP15.66■□□□□ 0.1
PTPN11-202ENST00000392597 TCRAP04437 139 aa15.66■□□□□ 0.1
PTPN11-202ENST00000392597 CDX1P47902 265 aaPredicted RBP15.66■□□□□ 0.1
PTPN11-202ENST00000392597 IBA57Q5T440 356 aaKnown RBP15.66■□□□□ 0.1
PTPN11-202ENST00000392597 LINC01356Q8N9X3 169 aa15.66■□□□□ 0.1
PTPN11-202ENST00000392597 RPL15P61313 204 aaKnown RBP15.65■□□□□ 0.1
PTPN11-202ENST00000392597 C19orf54Q5BKX5 351 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 RNASE7Q9H1E1 156 aaKnown RBP15.65■□□□□ 0.1
PTPN11-202ENST00000392597 PDZD2O15018 2839 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 CCDC168Q8NDH2 2452 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 TRAV34A0A0B4J273 112 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 LINC01548A6NM66 108 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 G3V318 75 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 M0QZK8 103 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 IGHV3-23P01764 117 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 PDE6HQ13956 83 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 GPR82Q96P67 336 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 ATP6V0BQ99437 205 aa15.65■□□□□ 0.1
PTPN11-202ENST00000392597 A6NDX4 124 aa15.64■□□□□ 0.09
PTPN11-202ENST00000392597 ADMP35318 185 aa15.64■□□□□ 0.09
PTPN11-202ENST00000392597 RPL19P84098 196 aaKnown RBP15.64■□□□□ 0.09
PTPN11-202ENST00000392597 CHRDL1Q9BU40 450 aa15.64■□□□□ 0.09
PTPN11-202ENST00000392597 PITPNC1Q9UKF7 332 aa15.64■□□□□ 0.09
PTPN11-202ENST00000392597 H3BTX0 84 aa15.63■□□□□ 0.09
PTPN11-202ENST00000392597 J3QLI3 93 aa15.63■□□□□ 0.09
PTPN11-202ENST00000392597 CMTM2Q8TAZ6 248 aa15.63■□□□□ 0.09
PTPN11-202ENST00000392597 TRBV7-1A0A0A6YYK4 115 aa15.63■□□□□ 0.09
PTPN11-202ENST00000392597 TRAV41A0A0B4J266 112 aa15.63■□□□□ 0.09
PTPN11-202ENST00000392597 SH2D7A6NKC9 451 aaPredicted RBP15.63■□□□□ 0.09
PTPN11-202ENST00000392597 EEF1AKMT3Q96AZ1 226 aa15.63■□□□□ 0.09
PTPN11-202ENST00000392597 MLST8Q9BVC4 326 aa15.63■□□□□ 0.09
PTPN11-202ENST00000392597 RABAC1Q9UI14 185 aa15.63■□□□□ 0.09
PTPN11-202ENST00000392597 SVEP1Q4LDE5 3571 aa15.62■□□□□ 0.09
PTPN11-202ENST00000392597 MAP1AP78559 2803 aaPredicted RBP15.62■□□□□ 0.09
PTPN11-202ENST00000392597 TRBV6-1A0A0K0K1D8 114 aa15.62■□□□□ 0.09
PTPN11-202ENST00000392597 BMPR1BO00238 502 aa15.62■□□□□ 0.09
PTPN11-202ENST00000392597 LTAP01374 205 aa15.62■□□□□ 0.09
PTPN11-202ENST00000392597 IGF1P05019 195 aa15.62■□□□□ 0.09
PTPN11-202ENST00000392597 NHLRC2Q8NBF2 726 aa15.62■□□□□ 0.09
PTPN11-202ENST00000392597 ZNF414Q96IQ9 312 aa15.62■□□□□ 0.09
PTPN11-202ENST00000392597 SMIM27A0A1W2PRY6 76 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 FAM223BA6NKX1 122 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 H3BUX3 64 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 GPR183P32249 361 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 MEOX2P50222 304 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 LOXL1Q08397 574 aaPredicted RBP15.61■□□□□ 0.09
PTPN11-202ENST00000392597 COA6Q5JTJ3 125 aaKnown RBP15.61■□□□□ 0.09
PTPN11-202ENST00000392597 SIGLEC15Q6ZMC9 328 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 FAM223AQ8IWN6 122 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 TRAPPC1Q9Y5R8 145 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 BRI3O95415 125 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 AVPP01185 164 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 SMIM6P0DI80 62 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 RPL7P18124 248 aaKnown RBP15.61■□□□□ 0.09
PTPN11-202ENST00000392597 PRSS57Q6UWY2 283 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 BCL6BQ8N143 479 aaPredicted RBP15.61■□□□□ 0.09
PTPN11-202ENST00000392597 RPH3ALQ9UNE2 315 aa15.61■□□□□ 0.09
PTPN11-202ENST00000392597 ZNF705GA8MUZ8 300 aaPredicted RBP15.6■□□□□ 0.09
PTPN11-202ENST00000392597 IGHG2P01859 326 aa15.6■□□□□ 0.09
PTPN11-202ENST00000392597 CLEC3BP05452 202 aa15.6■□□□□ 0.09
PTPN11-202ENST00000392597 EXOC3-AS1Q8N2X6 119 aa15.6■□□□□ 0.09
PTPN11-202ENST00000392597 CCDC140Q96MF4 163 aa15.6■□□□□ 0.09
PTPN11-202ENST00000392597 FOXC2Q99958 501 aa15.6■□□□□ 0.09
PTPN11-202ENST00000392597 PRRC2AP48634 2157 aaKnown RBP15.59■□□□□ 0.09
PTPN11-202ENST00000392597 RAB9AP51151 201 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 COX19Q49B96 90 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 OR8I2Q8N0Y5 310 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 HIST3H2BBQ8N257 126 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 C12orf57Q99622 126 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 GATCO43716 136 aaKnown RBP15.59■□□□□ 0.09
PTPN11-202ENST00000392597 ATP5G2Q06055 141 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 Q5PR19 223 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 C17orf77Q96MU5 243 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 SERTAD4Q9NUC0 356 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 ZNF492Q9P255 531 aa15.59■□□□□ 0.09
PTPN11-202ENST00000392597 IFITM10A6NMD0 228 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 H3BUA1 57 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 TOMM20LQ6UXN7 152 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 Q86TA4 180 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 ARL6IP6Q8N6S5 226 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 TMEM75Q8N9X5 138 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 NUDT10Q8NFP7 164 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 NUDT11Q96G61 164 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 GRAMD2BQ96HH9 432 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms