RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 Q8TAT8 98 aa13.23□□□□□ -0.29
SNX9-201ENST00000392185 TSPOP30536 169 aa13.22□□□□□ -0.29
SNX9-201ENST00000392185 TMEM136Q6ZRR5 245 aa13.22□□□□□ -0.29
SNX9-201ENST00000392185 A0A087X0M5 115 aa13.22□□□□□ -0.29
SNX9-201ENST00000392185 A0A1B0GX30 115 aa13.22□□□□□ -0.29
SNX9-201ENST00000392185 LEPROTL1O95214 131 aa13.22□□□□□ -0.29
SNX9-201ENST00000392185 ZNF726P1Q15940 193 aa13.22□□□□□ -0.29
SNX9-201ENST00000392185 CYB5R2Q6BCY4 276 aa13.22□□□□□ -0.29
SNX9-201ENST00000392185 LCNL1Q6ZST4 164 aa13.22□□□□□ -0.29
SNX9-201ENST00000392185 IGHV4-39P01824 125 aa13.22□□□□□ -0.29
SNX9-201ENST00000392185 RNASE4P34096 147 aaKnown RBP13.22□□□□□ -0.29
SNX9-201ENST00000392185 TRBV20OR9-2A0A075B6H5 130 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 FAM120AOSQ5T036 256 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 SLC50A1Q9BRV3 221 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 TUBA4BQ9H853 241 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 IGHV4-30-2A0A087WSY4 118 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 ZNF688P0C7X2 276 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 CR1LQ2VPA4 569 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 FAM90A2PQ658T7 463 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 IL17RELQ6ZVW7 336 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 ATOH7Q8N100 152 aa13.21□□□□□ -0.29
SNX9-201ENST00000392185 FABP5P3A8MUU1 101 aa13.21□□□□□ -0.3
SNX9-201ENST00000392185 UTF1Q5T230 341 aa13.21□□□□□ -0.3
SNX9-201ENST00000392185 Q71RC1 249 aaPredicted RBP13.21□□□□□ -0.3
SNX9-201ENST00000392185 HSPB8Q9UJY1 196 aa13.21□□□□□ -0.3
SNX9-201ENST00000392185 OVOL3O00110 214 aa13.21□□□□□ -0.3
SNX9-201ENST00000392185 MYOZ3Q8TDC0 251 aa13.21□□□□□ -0.3
SNX9-201ENST00000392185 TCRAP04437 139 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 FNDC4Q9H6D8 234 aaPredicted RBP13.2□□□□□ -0.3
SNX9-201ENST00000392185 OSTCQ9NRP0 149 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 FAM19A2Q8N3H0 131 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 NCKAP5O14513 1909 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 COLCA2A8K830 154 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 LDLRAD2Q5SZI1 272 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 SIGLEC15Q6ZMC9 328 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 PIP4P2Q8N4L2 257 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 FER1L6-AS1Q8NA97 138 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 C5orf30Q96GV9 206 aa13.2□□□□□ -0.3
SNX9-201ENST00000392185 EML5Q05BV3 1969 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 POU2AF1Q16633 256 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 NSUN5P1Q3KNT7 163 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 NUDT10Q8NFP7 164 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 NUDT11Q96G61 164 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 RITA1Q96K30 269 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 ZNF56Q15929 161 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 PSMG4Q5JS54 123 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 MAP1LC3AQ9H492 121 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 CDH23Q9H251 3354 aa13.19□□□□□ -0.3
SNX9-201ENST00000392185 AP5S1Q9NUS5 200 aa13.18□□□□□ -0.3
SNX9-201ENST00000392185 C19orf84I3L1E1 186 aa13.18□□□□□ -0.3
SNX9-201ENST00000392185 RRN3P1Q2M238 152 aa13.18□□□□□ -0.3
SNX9-201ENST00000392185 SYT8Q8NBV8 401 aa13.18□□□□□ -0.3
SNX9-201ENST00000392185 CDC42EP3Q9UKI2 254 aa13.18□□□□□ -0.3
SNX9-201ENST00000392185 NACAE9PAV3 2078 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 IZUMO1RA6ND01 250 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
SNX9-201ENST00000392185 TRBV9A0A0B4J1U6 114 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 A0A1B0GW64 132 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 C18orf15Q96N68 181 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 XIRP2A4UGR9 3374 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 ASIPP42127 132 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 VAMP3Q15836 100 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
SNX9-201ENST00000392185 PROP1O75360 226 aa13.16□□□□□ -0.3
SNX9-201ENST00000392185 FNDC10F2Z333 226 aa13.16□□□□□ -0.3
SNX9-201ENST00000392185 IGLV2-14P01704 120 aa13.16□□□□□ -0.3
SNX9-201ENST00000392185 ACANP16112 2415 aa13.16□□□□□ -0.3
SNX9-201ENST00000392185 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
SNX9-201ENST00000392185 TOMM40O96008 361 aa13.16□□□□□ -0.3
SNX9-201ENST00000392185 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
SNX9-201ENST00000392185 SSBP2P81877 361 aaPredicted RBP13.16□□□□□ -0.3
SNX9-201ENST00000392185 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
SNX9-201ENST00000392185 PRELID3AQ96N28 172 aa13.16□□□□□ -0.3
SNX9-201ENST00000392185 NUDT3O95989 172 aa13.15□□□□□ -0.3
SNX9-201ENST00000392185 ZFP36P26651 326 aaKnown RBP13.15□□□□□ -0.3
SNX9-201ENST00000392185 RHPN1-AS1Q9BWJ2 59 aa13.15□□□□□ -0.3
SNX9-201ENST00000392185 PEMTQ9UBM1 199 aa13.15□□□□□ -0.3
SNX9-201ENST00000392185 FLNBO75369 2602 aaKnown RBP13.15□□□□□ -0.3
SNX9-201ENST00000392185 IGLC7A0M8Q6 106 aa13.15□□□□□ -0.3
SNX9-201ENST00000392185 CD7P09564 240 aa13.15□□□□□ -0.3
SNX9-201ENST00000392185 G0S2P27469 103 aa13.15□□□□□ -0.3
SNX9-201ENST00000392185 GATA3P23771 443 aa13.15□□□□□ -0.3
SNX9-201ENST00000392185 ADMP35318 185 aa13.15□□□□□ -0.3
SNX9-201ENST00000392185 TANC2Q9HCD6 1990 aa13.15□□□□□ -0.3
SNX9-201ENST00000392185 NMUP48645 174 aa13.14□□□□□ -0.31
SNX9-201ENST00000392185 FAM110DQ8TAY7 271 aaPredicted RBP13.14□□□□□ -0.31
SNX9-201ENST00000392185 DUX3Q96PT4 197 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms