RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 IL4P05112 153 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 CSN2P05814 226 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 PFN1P07737 140 aaKnown RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 MMP7P09237 267 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 PPIBP23284 216 aaKnown RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 CNTFRP26992 372 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 CRYBB3P26998 211 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 BLVRBP30043 206 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 G6PCP35575 357 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 LPAR6P43657 344 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 GZMMP51124 257 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 POLR2JP52435 117 aaKnown RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 FOXA1P55317 472 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 C1QTNF8P60827 252 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 S100A10P60903 97 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 UBE2KP61086 200 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 PSG4Q00888 419 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 RPL18AQ02543 176 aaKnown RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 C1DQ13901 141 aaKnown RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 ENDOGQ14249 297 aaKnown RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 IGFBP7Q16270 282 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 LRRC75BQ2VPJ9 315 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 SLC25A35Q3KQZ1 300 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 C6orf99Q4VX62 202 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 BVES-AS1Q5T3Y7 98 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 SPATA31B1PQ5VZV4 182 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 Q6AWC8 147 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 SFXN4Q6P4A7 337 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 GUSBP11Q6P575 273 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 GLIPR1L1Q6UWM5 242 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF705AQ6ZN79 300 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 Q6ZUT4 128 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 MDP1Q86V88 176 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 TOMM5Q8N4H5 51 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 SPANXA2-OT1Q8N9U9 137 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 WDR31Q8NA23 367 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 GATD1Q8NB37 220 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 OR11H6Q8NGC7 330 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 OR52R1Q8NGF1 315 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 OR2T27Q8NH04 317 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 OR1L1Q8NH94 360 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 PPTC7Q8NI37 304 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 TWIST2Q8WVJ9 160 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 PLEKHB2Q96CS7 222 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 GPER1Q99527 375 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 DERL1Q9BUN8 251 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 SNRNP25Q9BV90 132 aaKnown RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 NMES1Q9C002 83 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 GTSF1LQ9H1H1 148 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 ST20Q9HBF5 79 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 POPDC3Q9HBV1 291 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 NPVFQ9HCQ7 196 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 BCL2L10Q9HD36 194 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 C21orf62Q9NYP8 219 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 MPC1Q9Y5U8 109 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 V9GYY9 64 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 BAHCC1Q9P281 2608 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 PLXNB2O15031 1838 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 COL4A2P08572 1712 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 CASP8AP2Q9UKL3 1982 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 IGLV2-18A0A075B6J9 118 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 FXYD6-FXYD2A0A087WZ82 144 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 TRAV1-2A0A0B4J238 106 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 TRAV8-6A0A0B4J262 113 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 TINCRA0A1B0GVN0 87 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 C7orf71A4D174 169 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 C5orf49A4QMS7 147 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 OR2T8A6NH00 312 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 TMEM262E9PQX1 116 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 FNDC10F2Z333 226 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 F8W1H4 67 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 H3BRM9 83 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 M0R1X1 148 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 PSPHP1O15172 72 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 PITX3O75364 302 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF682O95780 498 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 IGLV2-8P01709 118 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 IGHMP01871 453 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 APOC2P02655 101 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 ATP5G1P05496 136 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 RHOCP08134 193 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 LIMS3P0CW19 117 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 LIMS4P0CW20 117 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 PTHLHP12272 177 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 FAUP35544 74 aaKnown RBP1.74□□□□□ -2.13
PTPRC-205ENST00000391970 GUCA1AP43080 201 aaPredicted RBP1.74□□□□□ -2.13
PTPRC-205ENST00000391970 OR1E2P47887 323 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 ATP5G3P48201 142 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 INPP1P49441 399 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 RPL31P62899 125 aaKnown RBP1.74□□□□□ -2.13
PTPRC-205ENST00000391970 ATP5G2Q06055 141 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 Q5XG85 94 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 C12orf73Q69YU5 71 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 AMMECR1LQ6DCA0 310 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 DPPA3Q6W0C5 159 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 CYP2G1PQ6ZSU1 146 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 FAM231DQ6ZW35 169 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 SMIM5Q71RC9 77 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF101Q8IZC7 436 aa1.74□□□□□ -2.13
PTPRC-205ENST00000391970 RNF182Q8N6D2 247 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms