RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 HIST1H2BNQ99877 126 aa7.9□□□□□ -1.15
LTN1-203ENST00000389195 HIST1H2BMQ99879 126 aa7.9□□□□□ -1.15
LTN1-203ENST00000389195 C1RLQ9NZP8 487 aa7.9□□□□□ -1.15
LTN1-203ENST00000389195 ELOA3CA0A087WX78 387 aaPredicted RBP7.89□□□□□ -1.15
LTN1-203ENST00000389195 NPIPB5A8MRT5 1133 aa7.89□□□□□ -1.15
LTN1-203ENST00000389195 NDUFS8O00217 210 aa7.89□□□□□ -1.15
LTN1-203ENST00000389195 RAB5BP61020 215 aa7.89□□□□□ -1.15
LTN1-203ENST00000389195 TMEM249Q2WGJ8 235 aa7.89□□□□□ -1.15
LTN1-203ENST00000389195 ZNF414Q96IQ9 312 aa7.89□□□□□ -1.15
LTN1-203ENST00000389195 MRPL27Q9P0M9 148 aaKnown RBP7.89□□□□□ -1.15
LTN1-203ENST00000389195 ZNF98A6NK75 572 aa7.89□□□□□ -1.15
LTN1-203ENST00000389195 PAX1P15863 534 aa7.89□□□□□ -1.15
LTN1-203ENST00000389195 DEFB1P60022 68 aa7.89□□□□□ -1.15
LTN1-203ENST00000389195 GOLT1AQ6ZVE7 132 aa7.89□□□□□ -1.15
LTN1-203ENST00000389195 MRPL32Q9BYC8 188 aaKnown RBP7.89□□□□□ -1.15
LTN1-203ENST00000389195 OOSP1A8MZH6 123 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 B4DEV8 164 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 FLI1Q01543 452 aaPredicted RBP7.88□□□□□ -1.15
LTN1-203ENST00000389195 OR8I2Q8N0Y5 310 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 OR10G8Q8NGN5 311 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 A0A1W2PRE2 83 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 PEX7O00628 323 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 GZMBP10144 247 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 CBLN1P23435 193 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 DEFB113Q30KQ7 82 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 TOMM20LQ6UXN7 152 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 BAGE2Q86Y30 109 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 RNF182Q8N6D2 247 aa7.88□□□□□ -1.15
LTN1-203ENST00000389195 POLR3KQ9Y2Y1 108 aaPredicted RBP7.88□□□□□ -1.15
LTN1-203ENST00000389195 TRAV41A0A0B4J266 112 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 TRGV3P03979 118 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 PF4V1P10720 104 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 KIAA1644Q3SXP7 199 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 UNQ9165/PRO28630Q6UXU0 137 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 SETXQ7Z333 2677 aaKnown RBP7.87□□□□□ -1.15
LTN1-203ENST00000389195 PRNTQ86SH4 94 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 C19orf24Q9BVV8 132 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 EPDR1Q9UM22 224 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 MOB4Q9Y3A3 225 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 JMJD1CQ15652 2540 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 MUC21A0A0G2JKD1 596 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 MUC21A0A140T8X8 626 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 IFITM10A6NMD0 228 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 PLA2G2AP14555 144 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 SRD5A1P18405 259 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 TPPP2P59282 170 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 MUC21Q5SSG8 566 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 MRPL54Q6P161 138 aaKnown RBP7.87□□□□□ -1.15
LTN1-203ENST00000389195 LINC01356Q8N9X3 169 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 IGF2BP2-AS1Q96M15 143 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 ZNF48Q96MX3 618 aaPredicted RBP7.87□□□□□ -1.15
LTN1-203ENST00000389195 GRIFINA4D1Z8 144 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 C5orf52A6NGY3 159 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 TOMM40O96008 361 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 ZNF705DP0CH99 300 aaPredicted RBP7.87□□□□□ -1.15
LTN1-203ENST00000389195 ZNF705BP0CI00 300 aaPredicted RBP7.87□□□□□ -1.15
LTN1-203ENST00000389195 IGHV4-31P0DP07 118 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 RPL19P84098 196 aaKnown RBP7.87□□□□□ -1.15
LTN1-203ENST00000389195 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 C11orf52Q96A22 123 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 SHANK2-AS3Q9BTD1 123 aa7.87□□□□□ -1.15
LTN1-203ENST00000389195 FN1P02751 2386 aaKnown RBP7.86□□□□□ -1.15
LTN1-203ENST00000389195 TSPAN9O75954 239 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 FOLR2P14207 255 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 HIST1H1BP16401 226 aaKnown RBP7.86□□□□□ -1.15
LTN1-203ENST00000389195 MYCNOSP40205 109 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 Q8TAT8 98 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 ZNF502Q8TBZ5 544 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 GPR61Q9BZJ8 451 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 SMAD5-AS1Q9Y6J3 95 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 V9GYV3 84 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 ANK3Q12955 4377 aaKnown RBP7.86□□□□□ -1.15
LTN1-203ENST00000389195 IGKV2-40A0A087WW87 121 aaPredicted RBP7.86□□□□□ -1.15
LTN1-203ENST00000389195 WI2-2373I1.2A0A1W2PRP0 233 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 CXorf65A6NEN9 183 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 IGKV2D-40P01614 121 aaPredicted RBP7.86□□□□□ -1.15
LTN1-203ENST00000389195 CDPF1Q6NVV7 123 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 FAM110DQ8TAY7 271 aaPredicted RBP7.86□□□□□ -1.15
LTN1-203ENST00000389195 BIN3Q9NQY0 253 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 TMEM242Q9NWH2 141 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 THYN1Q9P016 225 aa7.86□□□□□ -1.15
LTN1-203ENST00000389195 ZNF705GA8MUZ8 300 aaPredicted RBP7.85□□□□□ -1.15
LTN1-203ENST00000389195 H3BRN7 92 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 GGCTO75223 188 aaKnown RBP7.85□□□□□ -1.15
LTN1-203ENST00000389195 S100PP25815 95 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 IER3P46695 156 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 UBE2G1P62253 170 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 IBA57Q5T440 356 aaKnown RBP7.85□□□□□ -1.15
LTN1-203ENST00000389195 SMR3AQ99954 134 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 MEGF9Q9H1U4 602 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 TRBV19A0A075B6N1 114 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 A6NDX4 124 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 PHOX2AO14813 284 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 TCRAP04437 139 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 CNN1P51911 297 aaKnown RBP7.85□□□□□ -1.15
LTN1-203ENST00000389195 RAB4BP61018 213 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 Q6ZQT7 251 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 C8orf49Q96NF6 230 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 CTDSP1Q9GZU7 261 aa7.85□□□□□ -1.15
LTN1-203ENST00000389195 TMSB15BA0A087X1C1 80 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms