RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 KLF12Q9Y4X4 402 aa12.94□□□□□ -0.34
NKX3-1-201ENST00000380871 PPIAL4CA0A0B4J2A2 164 aa12.94□□□□□ -0.34
NKX3-1-201ENST00000380871 IGHV1-24A0A0C4DH33 117 aa12.94□□□□□ -0.34
NKX3-1-201ENST00000380871 PPIAL4GP0DN37 164 aa12.94□□□□□ -0.34
NKX3-1-201ENST00000380871 VMA21Q3ZAQ7 101 aa12.94□□□□□ -0.34
NKX3-1-201ENST00000380871 ZNF596Q8TC21 504 aa12.94□□□□□ -0.34
NKX3-1-201ENST00000380871 IGHV2-26A0A0B4J1V2 119 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 TCRAP04437 139 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 OR4A5Q8NH83 315 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 CA7P43166 264 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 PRSS22Q9GZN4 317 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 FBXL15Q9H469 300 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 HIVEP3Q5T1R4 2406 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 LTAP01374 205 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 DLX6P56179 175 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 LYZP61626 148 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 NHLH1Q02575 133 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 TMEM70Q9BUB7 260 aa12.93□□□□□ -0.34
NKX3-1-201ENST00000380871 C19orf71A6NCJ1 209 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 OR4C46A6NHA9 309 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 CRYGCP07315 174 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 ATP5L2Q7Z4Y8 100 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 PMCHL2Q9BQD1 86 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 SPG11Q96JI7 2443 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 TOMM40O96008 361 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 C5orf17Q8NAS9 161 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 RPEQ96AT9 228 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 S4R3C0 116 aa12.92□□□□□ -0.34
NKX3-1-201ENST00000380871 C20orf202A1L168 122 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 KLRD1Q13241 179 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 MRPS16Q9Y3D3 137 aaKnown RBP12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 A8MWL6 223 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 TNFRSF13BO14836 293 aaPredicted RBP12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 CSN3P07498 182 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 RPL27AP46776 148 aaKnown RBP12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 PTTG1IPP53801 180 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 GOLT1AQ6ZVE7 132 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 PRNTQ86SH4 94 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 CHRDL1Q9BU40 450 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 ADORA2A-AS1P86434 159 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 C17orf77Q96MU5 243 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 TRGV9Q99603 122 aa12.91□□□□□ -0.34
NKX3-1-201ENST00000380871 NDUFS7O75251 213 aa12.9□□□□□ -0.34
NKX3-1-201ENST00000380871 PSG1P11464 419 aa12.9□□□□□ -0.34
NKX3-1-201ENST00000380871 SFTPCP11686 197 aa12.9□□□□□ -0.34
NKX3-1-201ENST00000380871 HES1Q14469 280 aa12.9□□□□□ -0.34
NKX3-1-201ENST00000380871 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.34
NKX3-1-201ENST00000380871 STXBP6Q8NFX7 210 aa12.9□□□□□ -0.34
NKX3-1-201ENST00000380871 DAZAP1Q96EP5 407 aaKnown RBP12.9□□□□□ -0.34
NKX3-1-201ENST00000380871 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
NKX3-1-201ENST00000380871 COL12A1Q99715 3063 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 COL8A1P27658 744 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 KLRB1Q12918 225 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 Q86TA4 180 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 LINC00311Q8N616 119 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 COX11Q9Y6N1 276 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 ZNF785A8K8V0 405 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 SYS1-DBNDD2H3BUS1 97 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 CNIH1O95406 144 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 RNASE8Q8TDE3 154 aaKnown RBP12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 MPV17L2Q567V2 206 aa12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 RBPMS2Q6ZRY4 209 aaKnown RBP12.89□□□□□ -0.35
NKX3-1-201ENST00000380871 LEPROTL1O95214 131 aa12.88□□□□□ -0.35
NKX3-1-201ENST00000380871 IGLV2-11P01706 119 aa12.88□□□□□ -0.35
NKX3-1-201ENST00000380871 RELQ04864 619 aaPredicted RBP12.88□□□□□ -0.35
NKX3-1-201ENST00000380871 C8orf46Q8TAG6 207 aa12.88□□□□□ -0.35
NKX3-1-201ENST00000380871 SIGLEC9Q9Y336 463 aa12.88□□□□□ -0.35
NKX3-1-201ENST00000380871 CHEK1O14757 476 aa12.88□□□□□ -0.35
NKX3-1-201ENST00000380871 ETFRF1Q6IPR1 90 aa12.88□□□□□ -0.35
NKX3-1-201ENST00000380871 ORAOV1Q8WV07 137 aa12.88□□□□□ -0.35
NKX3-1-201ENST00000380871 C22orf15Q8WYQ4 148 aa12.88□□□□□ -0.35
NKX3-1-201ENST00000380871 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 IGHV1-3A0A0C4DH29 117 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 TEX22C9J3V5 150 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 RBP4P02753 201 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 MC5RP33032 325 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 HIGD1AQ9Y241 93 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 FAM71F2Q6NXP2 309 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 SLC25A39Q9BZJ4 359 aaPredicted RBP12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 PPP1R14DQ9NXH3 145 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 KAAG1Q9UBP8 84 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 OVOL3O00110 214 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 IGLC1P0CG04 106 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 LGALS7P47929 136 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 TPPP3Q9BW30 176 aa12.87□□□□□ -0.35
NKX3-1-201ENST00000380871 BUB1B-PAK6H3BSN5 160 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 FOXE3Q13461 319 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 ZC2HC1AQ96GY0 325 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 APOHP02749 345 aaPredicted RBP12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 ARMS2P0C7Q2 107 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 ZNF492Q9P255 531 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 F11RQ9Y624 299 aaKnown RBP12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 TIMM23O14925 209 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 CRYGBP07316 175 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 KLF17Q5JT82 389 aaPredicted RBP12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 PVRIGQ6DKI7 326 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 PPP1R27Q86WC6 154 aa12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 BCL6BQ8N143 479 aaPredicted RBP12.86□□□□□ -0.35
NKX3-1-201ENST00000380871 ZNF738Q8NE65 137 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms