RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 PLGLAQ15195 96 aa11.36□□□□□ -0.59
CLCN4-201ENST00000380829 VMO1Q7Z5L0 202 aa11.36□□□□□ -0.59
CLCN4-201ENST00000380829 NPIPB3Q92617 1050 aa11.36□□□□□ -0.59
CLCN4-201ENST00000380829 EAF1Q96JC9 268 aaPredicted RBP11.36□□□□□ -0.59
CLCN4-201ENST00000380829 VPS13CQ709C8 3753 aa11.36□□□□□ -0.59
CLCN4-201ENST00000380829 GAGE12BA1L429 117 aa11.36□□□□□ -0.59
CLCN4-201ENST00000380829 GCHFRP30047 84 aa11.36□□□□□ -0.59
CLCN4-201ENST00000380829 BMI1P35226 326 aa11.36□□□□□ -0.59
CLCN4-201ENST00000380829 PMCHL1Q16048 86 aa11.36□□□□□ -0.59
CLCN4-201ENST00000380829 RUSC1-AS1Q66K80 236 aa11.36□□□□□ -0.59
CLCN4-201ENST00000380829 MRPL27Q9P0M9 148 aaKnown RBP11.36□□□□□ -0.59
CLCN4-201ENST00000380829 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
CLCN4-201ENST00000380829 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
CLCN4-201ENST00000380829 NUDT3O95989 172 aa11.35□□□□□ -0.59
CLCN4-201ENST00000380829 MFAP2P55001 183 aa11.35□□□□□ -0.59
CLCN4-201ENST00000380829 BPESC1Q9GZL8 116 aa11.35□□□□□ -0.59
CLCN4-201ENST00000380829 WNK2Q9Y3S1 2297 aa11.35□□□□□ -0.59
CLCN4-201ENST00000380829 IGHV3-21A0A0B4J1V1 117 aa11.35□□□□□ -0.59
CLCN4-201ENST00000380829 CX3CL1P78423 397 aa11.35□□□□□ -0.59
CLCN4-201ENST00000380829 SLAQ13239 276 aa11.35□□□□□ -0.59
CLCN4-201ENST00000380829 K7ERU9 68 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 GOSR1O95249 250 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 CA1P00915 261 aaPredicted RBP11.34□□□□□ -0.59
CLCN4-201ENST00000380829 PSG9Q00887 426 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 C18orf32Q8TCD1 76 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 CFHR4Q92496 578 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 CLEC5AQ9NY25 188 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 USP9XQ93008 2570 aaPredicted RBP11.34□□□□□ -0.59
CLCN4-201ENST00000380829 TEX22C9J3V5 150 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 M0R2Z0 102 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 MT-ND6P03923 174 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 CEACAM3P40198 252 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 CENPWQ5EE01 88 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 BVES-AS1Q5T3Y7 98 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 WDR73Q6P4I2 378 aa11.34□□□□□ -0.59
CLCN4-201ENST00000380829 SRSF12Q8WXF0 261 aaKnown RBP11.34□□□□□ -0.59
CLCN4-201ENST00000380829 IGKV1D-37A0A075B6S9 117 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 TRAV8-6A0A0B4J262 113 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 HES1Q14469 280 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 DYNAPQ8N1N2 210 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 SMIM12Q96EX1 92 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 hDV102S1A0JD36 115 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 HSBP1O75506 76 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 AMY1AP04745 511 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 HOXB4P17483 251 aaPredicted RBP11.33□□□□□ -0.6
CLCN4-201ENST00000380829 UBE2G1P62253 170 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 MORN5Q5VZ52 161 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 SLC25A33Q9BSK2 321 aa11.33□□□□□ -0.6
CLCN4-201ENST00000380829 TECRQ9NZ01 308 aaKnown RBP11.33□□□□□ -0.6
CLCN4-201ENST00000380829 UTP20O75691 2785 aaKnown RBP11.32□□□□□ -0.6
CLCN4-201ENST00000380829 TOX4O94842 621 aa11.32□□□□□ -0.6
CLCN4-201ENST00000380829 MT-CO2P00403 227 aa11.32□□□□□ -0.6
CLCN4-201ENST00000380829 APCSP02743 223 aa11.32□□□□□ -0.6
CLCN4-201ENST00000380829 RNASEKQ6P5S7 137 aaKnown RBP11.32□□□□□ -0.6
CLCN4-201ENST00000380829 PQLC2Q6ZP29 291 aa11.32□□□□□ -0.6
CLCN4-201ENST00000380829 ZNF503Q96F45 646 aa11.32□□□□□ -0.6
CLCN4-201ENST00000380829 RNF5Q99942 180 aa11.32□□□□□ -0.6
CLCN4-201ENST00000380829 OVOL3O00110 214 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 NBR2O15453 112 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 OR7C2O60412 319 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 CNIH1O95406 144 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 MOSP00540 346 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 IGHV4-39P01824 125 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 PRB1P04280 392 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 OR10J4P0C629 311 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 DEFB125Q8N687 156 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 TRAV5A0A0B4J249 113 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 TCRBV4S1A1TA0A5B7 111 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 C2orf70A6NJV1 201 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 SH2D7A6NKC9 451 aaPredicted RBP11.31□□□□□ -0.6
CLCN4-201ENST00000380829 GNG4P50150 75 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 RPS20P60866 119 aaKnown RBP11.31□□□□□ -0.6
CLCN4-201ENST00000380829 PAX2Q02962 417 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 C1orf122Q6ZSJ8 110 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 S100A7AQ86SG5 101 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 SERTAD4Q9NUC0 356 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 ARL2-SNX15V9GYD0 113 aa11.31□□□□□ -0.6
CLCN4-201ENST00000380829 PSMB11A5LHX3 300 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 CORTO00230 105 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 NBEAP1P0C6P0 100 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 LMO4P61968 165 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 CLUHP3Q96NS8 147 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 SIRPDQ9H106 197 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 F11RQ9Y624 299 aaKnown RBP11.3□□□□□ -0.6
CLCN4-201ENST00000380829 C9JCJ5 164 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 HLA-DQA1P01909 254 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 THAP8Q8NA92 274 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 NHLRC2Q8NBF2 726 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 CRYBG3Q68DQ2 2970 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 ZNF462Q96JM2 2506 aa11.3□□□□□ -0.6
CLCN4-201ENST00000380829 OR4C46A6NHA9 309 aa11.29□□□□□ -0.6
CLCN4-201ENST00000380829 CRYGCP07315 174 aa11.29□□□□□ -0.6
CLCN4-201ENST00000380829 CRYBB3P26998 211 aa11.29□□□□□ -0.6
CLCN4-201ENST00000380829 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
CLCN4-201ENST00000380829 TXNDC17Q9BRA2 123 aa11.29□□□□□ -0.6
CLCN4-201ENST00000380829 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
CLCN4-201ENST00000380829 MAP1AP78559 2803 aaPredicted RBP11.29□□□□□ -0.6
CLCN4-201ENST00000380829 KMT2BQ9UMN6 2715 aaPredicted RBP11.29□□□□□ -0.6
CLCN4-201ENST00000380829 ABCA1O95477 2261 aa11.29□□□□□ -0.6
CLCN4-201ENST00000380829 COX7A2P2O60397 106 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms